Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6928 221 2e-52 seq14392 197 2e-45 seq1421 111 2e-19 >seq6928 Length=2931 Score = 221 bits (244), Expect = 2e-52 Identities = 952/1476 (64%), Gaps = 48/1476 (3%) Strand=Plus/Plus Query 110646 TGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCA 110705 |||| || | ||| ||||| || ||| || || ||||| || | | |||||| Sbjct 738 TGAGATCTTGGACAAGGTGAGGATTCACACAAACGAATTCACCAGCTAAGACTCTTCTGG 797 Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765 ||| | |||| ||||| || ||||| ||||| || || | |||||| | || | Sbjct 798 TGTAAACATTTGAGGTGTAAGGCTCAAAAGTCTCATTGTTTCCAAGGATTTGAGAAGTTG 857 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGA--TGCG 110823 ||||||||||||| ||||| | || || ||| | | ||| | | | ||| | | Sbjct 858 AGGCTGTTGGCATGGGTGCTAATAAGAGTGAGTTTCTAGCACCATATTTCATGACATCCT 917 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTT----GAGCTTGGTTTCACCTTCCCACATGTCAA 110879 || | || |||||| || || | |||| |||||| |||||| | ||||| Sbjct 918 GTC--TAAGTTAATCCCAATCATATCTATCAGAGCAAGGTTTCTT-TTCCCAGAGGTCAA 974 Query 110880 ACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939 | | | ||||| || || || || | ||||||||||| | |||| ||| Sbjct 975 ATTAGAATTTACCTTGAGATAGTGGTGATCCTTGGAAGGTTTCATAAGGTCCTTCAACTT 1034 Query 110940 CAGCCAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 110998 ||| | ||| | || || |||| ||| || ||||| || ||||||||||| || Sbjct 1035 TAGCGATTTCCATAGAG-GCTTCCATGGAGGCATGATAGATAGTTTCAAAGATTAACTCA 1093 Query 110999 TTCA-TCTCCTTGGCTTC--ATCTGAATCAAATGCGTAGCGGCACAAAATA-AATACATC 111054 || | |||| || || |||| || |||| ||| | | | ||| |||| Sbjct 1094 TTGAGTCTCAATGCTTTAGGATCT---TCGAATG-GTATTTTGAGCATTTGTAATGCATC 1149 Query 111055 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGCG-C 111111 |||| ||||||||||| | |||||| ||||| |||| | |||||| | || || | Sbjct 1150 AGCGAATCCTTGAACACCGATACCAATTGGTCTATGTCTAAGATTAGAGTATTTAGCTTC 1209 Query 111112 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 111171 || ||| ||||| ||| | ||||| | | || || ||||| |||| |||| Sbjct 1210 AG---CAATTGGATAGTGATTGTTATCAATAATTTTATTAAGGTTTTTTGTAATTCTCTT 1266 Query 111172 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 111231 || | | || | || ||||||||| | || |||| |||| | | Sbjct 1267 GGTTACATAGTGTAACTTCTCATAATCATATTCTTAGGTATCTTTTATGACGAATCTATT 1326 Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291 ||| || || |||||||| |||||||| || | || || | |||||||| | || Sbjct 1327 AAGTGCAATGGATGCCAAGTTGCAAACTGCTATTTCGTCGGGACTGGTGTACTCCACTAT 1386 Query 111292 TTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT 111351 ||| ||||| | ||||| |||||||| || || | || | |||||| ||| | || Sbjct 1387 TTCAGTACAGAGATTGGAGCTCTTAATGGTTCCTAGGTTTTATTGGTTTGACTTTCTATT 1446 Query 111352 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATT-TGAGAATAG 111410 ||| | ||| ||||||||||||||||| || || || || ||| |||| | || | | Sbjct 1447 GCAGGTATCTTTGTAGAGCATGTAGGGGGTTCCAGTTTCTATCTAAGATTCTACGATTTG 1506 Query 111411 CCTTCCAAA--CATCGGCGGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTA 111465 | |||| | |||| || ||||| | | | | ||| || || || Sbjct 1507 AC-TCCAGAGCCATC-----TTGCCTTAATGGACTTTCTACCTCTTCCATCTCTTTCATA 1560 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTT-G 111523 | |||||| ||||||||||| | || | || | | |||||| || || | Sbjct 1561 TTACTCATAGAGGTTTTCAAACTCCT-ATCCCCAGCAATTACTCAAACCTGG-GCATTCG 1618 Query 111524 TCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGA 111583 | ||||| | || | ||| | || | ||| || | ||||||||||| ||||| Sbjct 1619 TTGGGACACATCAGGGTCCAGTCTTCATTCTTCTCGACTCTTTTCATGAAAAGATCTGGT 1678 Query 111584 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643 ||||| || | ||||||||||||| | || || | ||| || || || Sbjct 1679 ATCCAAAGTGCGTAAAAGAGATCTCTGGCTCTGTTTTCCTCCTTACCATGATTCTTTCTC 1738 Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 111703 | | ||||| || |||||| |||||||||||||| | |||||| || | | |||| Sbjct 1739 AGTTAGAGGAAGTCATAGATATCTGCGTGCCATGGCTCCACATAGACAGCAAACGCTCCC 1798 Query 111704 TTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 |||| || ||| |||||| ||||| | || ||| | |||||||| |||||| Sbjct 1799 TTTCTTTTACCACCACCTTGATCAACATATCTTGCAGTGTCATTAAATACCTTAAGCATG 1858 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820 ||||| | ||||| ||| | |||||||| || | || || | |||||| | Sbjct 1859 GGAATTAAACCATTTGAATATCCATTTGTACCTCTGATGTATGAATCTGCGGCTCTGATG 1918 Query 111821 TC--ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 || || | | | | || ||||| ||||| ||||||||| ||| || | | | Sbjct 1919 TCTGATACA-GAG-ACACCGATACCTCCAGCTGCCTTTGAGATGACAGCAATCTACTTGA 1976 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 | ||| || |||| || | ||||| |||||||| ||| | | ||||||| || Sbjct 1977 GTGTTTCAAAGATTCCATCAATTGAATCCTCCTTCATGGTTAATAAGAAGCAAGAACTCA 2036 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998 |||| ||| |||| ||||| | ||||| | || || || ||||| ||||| || Sbjct 2037 TCTGTGGTTTTGGAGTACCTGAGTTGAACAAAGTAGGAGTGGCGTGTGTGAACCACAATT 2096 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 | ||| ||||| ||||| || | || || | |||||| ||| || || || Sbjct 2097 GACTCATAAGATCGTAGGTCTCGAATGCTGACTCGAGATCTTCCTTGTGAATACCAATAC 2156 Query 112059 CGACCCGCATGAACATGTACTGTGGGGTTTCCATGA 112094 ||| | ||| | ||||| | || |||| |||| Sbjct 2157 TGACTCTCATAAGCATGTGTTAAGGTCTTTCAATGA 2192 >seq14392 Length=2979 Score = 197 bits (218), Expect = 2e-45 Identities = 934/1442 (65%), Gaps = 60/1442 (4%) Strand=Plus/Plus Query 110678 ACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCAT 110737 || || |||||||| | |||||| |||||||| || ||||| ||||| |||| | Sbjct 750 ACGAATTCACCTGCTAACACTCTTCTGGTATAGATGTTAGTGGTGTAAGGTTCGAAGCTT 809 Query 110738 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 110797 ||||| || || | |||| || || || || || ||||| || || | ||| ||| | Sbjct 810 TCATTGTTTCCTAGAATTTATGAAGTTGAAGCGGTAGGCATAGGGGCAACCAATAGAGAG 869 Query 110798 TTACGAAGACCCTTCTCCTTGATG-CGTTCCTTGAGAACATCCCAGTCGTAG--TTGAGC 110854 || | ||| | | ||| | |||| ||| || ||||| | ||| |||| | Sbjct 870 TTTCTGGCACCGTATTACTTAACCTCGTTTCTTAAGTTT-TCCCAATTGTATCTTTGA-C 927 Query 110855 TTGG---TTTCACCTTCCCACATGTCAAACT-GAAGCACCCCTTGGGAC-GCG-GGAGAA 110908 |||| |||| | |||| |||| ||||| | ||| |||| || | | ||||| Sbjct 928 TTGGCAATTTCTCGTTCC-ACATATCAAATTAGAATATACCCTA---ACTGAGTGGAGAT 983 Query 110909 CCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGAT 110968 || || | ||||||| |||||| | || | ||| || | | || || Sbjct 984 CCTATGAAAGATTCATAGTAACCTTCTTTCTTGGCGATGTCAACACTGGATTACATAGAA 1043 Query 110969 GCGTGATACATGGTTTCAAAGA-TACGAGCATTCATCTCCTTGGCT---TCATCTGAATC 111024 || ||||| ||||| ||||| | | | | ||| | | | |||| || ||| || Sbjct 1044 GCATGATAAATGGTCTCAAATACTTCTTG-ATTGAATTAATAGGCTCTTTCGTCT---TC 1099 Query 111025 AAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 111083 || | ||| | | || |||| |||| || ||||||| |||||| | |||||| | Sbjct 1100 GAAGG-GTATCTTTAAAAGCATAAGGGCATCAGCAAGACCTTAAACACCGATACCAATTG 1158 Query 111084 GTCTGTGTCGCATATTAGACTTTCGCGCAG--TCTCAACGGGATAAAAATTTCTGTCAAT 111141 ||||||||| | ||||| ||| || || ||| ||||| || || | ||||| Sbjct 1159 GTCTGTGTCTAAGGTTAGAGTTTTTGGCTTCATCGCAA--GGATAGAAGTTACCATCAAT 1216 Query 111142 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA 111201 || || ||| |||||| | |||| | | |||| | ||| ||||| ||||| ||||| Sbjct 1217 GATTCTGTTAAGATTTCTAGTAATAGAATAGGTGACTGAATGTAGTTTCTCATAGTCAAA 1276 Query 111202 AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGC 111261 | || || ||| ||||| | || | | || || || | ||||||||||| Sbjct 1277 C-----ACTCCATT-ATTAACATATCTGGGTAATGATATGGAGGCGAGGTTGCAAACAGC 1330 Query 111262 CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGT 111321 ||||| ||||| || | ||||| ||| | || ||||||||||| || Sbjct 1331 TACTTCATCAGGTGAAGTGTATTCAATGATTTCGCAACAGAGATTAGAACTCTTAATGGT 1390 Query 111322 CCCCAAATTCTTTTGGTTACTCTTCTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCG 111380 || | ||| ||||| || || ||||| || | |||||||| ||||| ||||| | Sbjct 1391 ACCGAGATTTTTTTGATTGGATTTATTGTTTGCGTGG-TCCTTGTAAAGCATATAGGGAG 1449 Query 111381 TCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACAATGG 111440 | || || || | | || | ||||| || ||||| | |||| || ||| Sbjct 1450 TACCGGTTTCAATTTAACTTTCAATAATAGTCTCCCAAAGTTTCATGGCTTTTA---TGG 1506 Query 111441 -CGTTGGCCCG-TCCCTCCGCCT-CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCA 111497 | || |||| | ||| || | | || || ||||| || ||||| || | ||||| Sbjct 1507 TCTTTCGCCCAATACCTTAGCTTTCATATTTAGTGTAAAGAGCTTCGAAGGCATCACCAT 1566 Query 111498 CCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCT 111557 | || |||| || || | | || ||||| || | ||| | ||| || Sbjct 1567 AGACATCATAGAGTCCCTTAGCTTCATTAGGGCAGAAGAGTGTCCAATCACCGTTATCTC 1626 Query 111558 CAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAG 111617 || | |||||| || || ||||| ||||| |||| | || ||||||||| | Sbjct 1627 TGACTCTCTTCATAAATAGATCTGGGATCCAAAGGGCATAGAAAAGATCTCTAGCTCTTT 1686 Query 111618 CCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATG 111677 ||||| | ||| || || | || | |||||| || | | ||| |||||||||| Sbjct 1687 ATTCTTCCTTACCGTGATTCTTTTTTAGTTGAAGGAAATCAAAAACATCTGCGTGCCATG 1746 Query 111678 GCTCAAGATAGACTGCGATAGATCCCTTTC---GACGCCCAGCTTGATTTACATAGCGCG 111734 | |||||||||| |||| || ||||||| | ||| |||| | || || | | Sbjct 1747 GTTCAAGATAGATAGCGAATGAACCCTTTCTCTTTCCACCACCTTGGTCAACGTATCTAG 1806 Query 111735 CTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCC 111794 | || | || ||||| | |||||| || | || ||||| || || ||||| || ||| Sbjct 1807 CAGTTTCATTGAATACTCTAAGCATGGGGACAAGACCATTGGAGTGTCCATTAGTACCCT 1866 Query 111795 GAATACGAGAT-TTATTGGCTCTCACATCATGGATGTGCA--TCCCAATACCCCCAGCCC 111851 ||| || | | | ||||| | || || || ||| ||| | | || ||||| | Sbjct 1867 TGATA-TAGCTGCCAGTAGCTCTAATATTAT-GAACAGCAAGTCCGACT-CCTCCAGCAC 1923 Query 111852 ACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCT 111911 ||||||||| | ||| | | ||||||| ||||||| || | ||||| || |||| Sbjct 1924 TCTTTGAGATAAGAGCAATGTTCTTAAGAGTATCATAGATTCCATGAATTGAATCATCCT 1983 Query 111912 T-GTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGG 111970 | | | |||| ||| || ||| ||| | || | || ||||| |||||||| || Sbjct 1984 TCATCATCAATAA-GAAACAGCTGCTCATTTAAGGCTTAGGGGTACCTGCATTGAATAGA 2042 Query 111971 GTTGGTGTTGCGTGAATGAA-CATACCTTGGGA--CATCTTGTCGTATGTCTCCAAGACA 112027 || ||||| ||||| | || ||| ||| | ||| || || ||||| | | Sbjct 2043 GTAGGTGTGGCGTGGGTAAACCAT---TTGTCACTCATAAGGTTATAGGTCTCAATAGCG 2099 Query 112028 GAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTT 112087 | |||||| |||||| ||||| || | || ||| | ||| | ||| | |||||| || Sbjct 2100 GCATCAATATCTTCCTTATGGATACCAACTGAGACTCTCATTAGCATATGCTGTGGTCTT 2159 Query 112088 TC 112089 || Sbjct 2160 TC 2161 >seq1421 Length=1529 Score = 111 bits (122), Expect = 2e-19 Identities = 171/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| | ||| ||||||| || || || ||||| |||||| || ||||||||||| || Sbjct 1019 GTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAGTCCTGGCATGAGTCC 960 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 || ||||| | ||| |||| | ||||| || || || ||||| |||||||| || | Sbjct 959 ACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAATATACCCTCAACTGA 900 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| || | ||| |||| ||| || || || ||| |||| ||| ||| Sbjct 899 AGCGAAAGCAACTAGCCTTTCAGCGA---AGCTAGCTGTTTCACCAATCCATCTCAATGC 843 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||||| ||||| || | | ||| | | ||| || ||||| ||||| | ||||| Sbjct 842 CCATTCTGCCTTTTTAGTGACAACTGGGATATTTTAGACGGCTTTGAATAAAT-ATTCTT 784 Query 122910 TT 122911 || Sbjct 783 TT 782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627864134896800