Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1421 105 8e-18 >seq1421 Length=1529 Score = 105 bits (116), Expect = 8e-18 Identities = 142/196 (72%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| | ||| || || | |||||||| ||||| |||||| || ||||||||||| || Sbjct 1019 GTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAGTCCTGGCATGAGTCC 960 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 || ||||| | ||||||||| | ||| || |||||||| ||||| || ||||| || | Sbjct 959 ACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAATATACCCTCAACTGA 900 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAG-GAGCGGGACTTTGTATCAAACCACTTCATCG 130205 ||||| |||| || | ||||| ||| ||| | || | ||| ||| ||| | Sbjct 899 AGCGAAAGCAACTAGCCTTTCAGCGAAGCTAGCTG----TTTCACCAATCCATCTCAATG 844 Query 130206 CCCACTGCGCCTTTTT 130221 |||| | |||||||| Sbjct 843 CCCATTCTGCCTTTTT 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618269900001480