Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq10450 114 6e-21 seq9521 86.0 3e-12 >seq10450 Length=6933 Score = 114 bits (126), Expect = 6e-21 Identities = 318/474 (67%), Gaps = 19/474 (4%) Strand=Plus/Plus Query 64876 AATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAAT 64935 ||||| |||||| ||||||| |||||||| | ||||||||||| |||| |||| ||||| Sbjct 4252 AATGTAAGTACTCCATCCTGTTCCAATACCTTCTGAGCCATTTACTAAACTCATTGGAAT 4311 Query 64936 AATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAAT 64995 || ||| |||| | ||| |||| | | | || || || || | || || |||| Sbjct 4312 GATAGGTAGATAATAATCAGGTTCAATACTTTGGCCTTCTTCTTCTAGGTAATTTAAAAC 4371 Query 64996 GGCATCATCCTCTT-TTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATAT 65054 |||||||| |||| |||||| ||| | | ||||| | || | | ||| | |||| Sbjct 4372 AGCATCATCATCTTGATGGAAA-ATATATCTAGTTACTGGGTTTAGATTTGTAAAGATAT 4430 Query 65055 ATCTTTCGGA--TGCGTGGTCTTGTCC-AGTTCGT--CGTGTTCCAAACTGACCATTTGG 65109 | | ||| || |||| ||| || || || || ||||||| ||||| || Sbjct 4431 AAC--GAGGACTAGCTGCTTCTTTTCCTCCTTAGTTACGAGTACCAAACTATCCATTAGG 4488 Query 65110 CATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCT-- 65167 || | || ||||| || || || | ||| || || |||||| |||||| | | Sbjct 4489 CAAAAGCAAGTTAATGTTATTACTGCCTACAAAGTTTTGTGCCATTGTGATAATAGTTTG 4548 Query 65168 GCATTTAAAC--TCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAA 65225 ||| || | | | ||| || || ||||| |||| |||||| ||||| || | Sbjct 4549 GCA---AAGCGATTG-TTCTCCATGGTGATAGGCTGAGTGTTCACCTACATAACCTACCA 4604 Query 65226 ATTGAGCAACTTTTATTTCCGTTGTTAA-ATTCTTTTTAAATGCAGAATACAATATTTTC 65284 ||| || |||||||||| | | |||| ||||| |||||| || | | || || ||| Sbjct 4605 ATTATGCTACTTTTATTT-CATCCTTAAGTTTCTTCTTAAATACACAGAATAAAATCTTC 4663 Query 65285 CGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATCA 65338 | | || | ||| | ||||| |||| | ||||| ||| | |||||| Sbjct 4664 CTTTGACCAGGTTTGAGGCCATCACATAAACTTGGAATAGATCTTTGGCAATCA 4717 >seq9521 Length=4824 Score = 86.0 bits (94), Expect = 3e-12 Identities = 201/296 (68%), Gaps = 8/296 (3%) Strand=Plus/Minus Query 65086 TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATT 65145 || ||| |||||||||||| | ||||| | ||| || | || || |||| ||| Sbjct 2405 TCTTGTACCAAACTGACCAATAGGCATAAGTAAGTTTAGGTTATTACTTCCAACGTAATC 2346 Query 65146 CTGAGCCATTCCGATAATTGCTGCATTT--AAACTCGCTTCACCGTGATGATATCCTGAA 65203 | |||||| ||||| | ||||| |||||| ||||| |||||||| | | Sbjct 2345 TTAAGCCATATTTATAATAG--TCATTTGCAAACTCATCTCACCATGATGATAAGCAGTT 2288 Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTA 65263 | || | | ||||||| |||| ||| || || ||||| | | |||| || | ||| Sbjct 2287 TACTCTGCAATATATCCAGATAATTAAGCCACCTTAATTTCAGAT-TTAAGTTTTCTTTT 2229 Query 65264 AATGCA-GAATACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAATTA-GGAA 65321 || ||| | | |||||||| ||| | | | ||| || ||||||| ||| ||| |||| Sbjct 2228 AAAGCATCCAAATAATATTTTTCGTTATCCAGGTTTTAAACCATCCA-TAATTTATGGAA 2170 Query 65322 TGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTCT 65377 | ||| | |||| | |||||||| || |||||| | | |||||||||| Sbjct 2169 TCGATCTTAGATTATCAGCATGGGAGAAATGAATTAATTCTCTATCAATAAATTCT 2114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235618580539950