Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq16706 150 2e-31 seq19055 149 7e-31 seq6006 105 8e-18 seq1421 89.7 6e-13 >seq16706 Length=515 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| ||||| || ||||| ||||||||||| |||||| || | Sbjct 391 ATGCAAATCTTCGTCAAGACTCTTACTGGAAAGACCATTACTCTTGACGTTGAGCCATCT 332 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || || |||||||||||||| || || || || || || Sbjct 331 GACACAATTGAAAACGTCAAAGCAAAGATTCAGGACAAGGAAGGTATCCCACCCGATCAA 272 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||||||||| ||||| || |||| | || || ||||||| || Sbjct 271 CAAAGACTTATCTTTGCTGGTAAACAACTTGAAGATGGAAGAACTCTTTCAGACTACAAC 212 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | || ||||| || || ||||| | |||||| Sbjct 211 ATTCAGAAGGAGTCTACCCTTCACTTGGTCTTG 179 >seq19055 Length=771 Score = 149 bits (164), Expect = 7e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||| | ||||| || ||||| | |||||||| || || |||||||| || || || Sbjct 650 ATGTAGATCTTCGTTAAGACCTTAACCGGCAAAACCATCACTCTTGACGTCGAACCATCA 591 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| |||| | |||||||| || || || ||||| || |||||||| || || Sbjct 590 GACACCATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTATTCCTCCCGATCAA 531 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || ||||| || ||||||||||| ||||| | | ||| || |||||||||| Sbjct 530 CAGAGACTTATTTTCGCCGGTAAGCAACTTGAGGACGGAAGAACCTTATCAGACTATAAC 471 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | ||||| ||||||||||| || | ||||| Sbjct 470 ATTCAAAAAGAATCCACTCTCCACTTGGTCTT 439 >seq6006 Length=2920 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||| | || || |||||||| | || || |||||||||||||| || || ||| | Sbjct 2816 AATGTAGATATTCGTCAAGACTTTGACGGGTAAGACTATTACTCTCGATGTCGAGCCCTC 2757 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| ||| | ||| | ||||| || ||||| ||||| || || || || || || || Sbjct 2756 TGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATCCCCCCCGATCA 2697 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | || || |||||||| ||| | | || || | | ||| | | || || || Sbjct 2696 ACAAAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGAAGAACCTTGTCTGATTACAA 2637 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 ||||||| ||||| |||||||| | ||||| Sbjct 2636 CATCCAAAAAGAATCAACTCTTCACTTGGTCTT 2604 >seq1421 Length=1529 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 ||||| || | || || || || ||||||||||| || |||||||| ||||||||||| Sbjct 891 GCTTTCGCTTCAGTTGAGGGTATATTCTTTTCTGGCTCTTTCTGTTCAATTTTCTGGCTC 950 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845 || || || || || |||||||| || | || || || ||||| |||||| | || || Sbjct 951 AAGAAACGTGGACTCATGCCAGGACTTACCTTCTCTAATGAGCTCATCTCTAGAGATGAA 1010 Query 64846 GG 64847 || Sbjct 1011 GG 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570157963158960