Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq19055 104 1e-17 seq16706 100 2e-16 >seq19055 Length=771 Score = 104 bits (114), Expect = 1e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || ||||| ||||||||| || |||||||||||||| ||||| Sbjct 424 CCTCCTCTGAGTCTTAAGACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGAT 483 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| |||| |||||||| |||||||| || || | | |||||| || || || Sbjct 484 AAGGTTCTTCCGTCCTCAAGTTGCTTACCGGCGAAAATAAGTCTCTGTTGATCGGGAGGA 543 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||| ||| |||||| || | | ||| |||||| || || Sbjct 544 ATACCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCTGATGGTTCGACG 603 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || ||||| |||||||| || || || || |||| ||| Sbjct 604 TCAAGAGTGATGGTTTTGCCGGTTAAGGTCTTAACGAAGATCTACAT 650 >seq16706 Length=515 Score = 100 bits (110), Expect = 2e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| || | ||| ||||| || || || |||||| |||||||| || ||||| Sbjct 164 GCCTCCTCTGAGTCTCAAGACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCTGA 223 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| |||| | ||||||||||||||||| ||||| || | | ||||| || || || Sbjct 224 AAGAGTTCTTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGTCTTTGTTGATCGGGTGG 283 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTC 34646 | || |||||||| ||| |||| ||| ||| | ||||||||| Sbjct 284 GATACCTTCCTTGTC-CTGAATCTTTGCTTTGACGTTTTCAATTGTGTC 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314647579794239