Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq7827 89.7 4e-13 >seq7827 Length=2313 Score = 89.7 bits (98), Expect = 4e-13 Identities = 184/270 (68%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 118375 AAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGT-GTGGG 118433 |||||| ||| || || |||||||||||||||| ||| || | | ||| | ||| Sbjct 674 AAATCTGAAAATTTGAACTCTTCTATATTTTTGACATCAGGATTAAGTAAGAGTTGAGGG 733 Query 118434 AAACGGGAGA-GGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGA 118492 || |||| | || | ||| | | || ||| | |||||||| |||||| | || | Sbjct 734 AA--GGGATAAGGGTATCTTTTTAATTATTCTTTTAATGGCTCAACATGATTCTTGTAAA 791 Query 118493 CATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAA 118552 |||||||||| |||| ||||| || ||||| |||| || | ||||||| Sbjct 792 CATGAGCATCTCCAAGAACATGTACAAACTCACCTCTCTTAAGTCCGCAGACTTGAGCAA 851 Query 118553 TCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTG 118612 ||| | || | | | || || || | ||||| || ||||| ||||||||||| Sbjct 852 GCATACAAGTAAGGAGAGAATAACTAGCAATGTTAAAGGGTACACCTAGACCCATGTCGC 911 Query 118613 CTGATCTCTGGTACAATTGGCAAGAGAGCT 118642 ||| || || |||| |||||| || |||| Sbjct 912 ATGACCTTTGATACATTTGGCATGATAGCT 941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414368785144012