Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq6006 100 2e-16 seq19055 96.9 2e-15 >seq6006 Length=2920 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||| |||| ||||| || || | ||||| || || || |||||||| || || || Sbjct 2818 AAAATGTAGATATTCGTCAAGACTTTGACGGGTAAGACTATTACTCTCGATGTCGAGCCC 2759 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | |||| | || || ||| |||||||||||| | || || ||| Sbjct 2758 TCTGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATCCCCCCCGAT 2699 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| | | || ||||| || || | ||||||||| | | || || |||||| Sbjct 2698 CAACAAAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGAAGAACCTTGTCTGATTAC 2639 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| |||||||| || || | || || || ||||| | ||||||| Sbjct 2638 AACATCCAAAAAGAATCAACTCTTCACTTGGTCTTAAGACTTAGAGGAGG 2589 >seq19055 Length=771 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || ||||||||||| ||||| | | Sbjct 422 ATGCAGATCTTTGTAAAGACCCTCACCGGTAAGACCATCACTCTCGACGTTGAACCATCT 363 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | ||| || ||| ||||| ||||| | || || |||||| Sbjct 362 GACACTATCGAGAACGTCAAAGCCAAGATTTAGGACAAGGAAGGAATCCCTCCCGATCAA 303 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || || || ||| || | || |||| | || | | ||||||||| Sbjct 302 CAGAGATTGATCTTCGCTGGTAAATAATTAGAGGACGGTAGAACACTCAGTGATTACAAC 243 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || || || || | || ||||| | || || |||| ||| Sbjct 242 ATTCAGAAGGAATCAACCCTCCACTTAGTCCTTAGATTAAGAGGCGGA 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337921512902564