Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1421 196 4e-45 >seq1421 Length=1529 Score = 196 bits (216), Expect = 4e-45 Identities = 487/731 (67%), Gaps = 9/731 (1%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || ||||| ||| |||||||| || |||||||| ||| || || | Sbjct 1324 TTTTGGTACTCTCCTACTCTCTTCTCGAAGAAGTTTGTTTTGCCAGTTAATGAGATCATG 1265 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTT-TAGAGCTACAAG 4375 ||||| | ||||| ||||| | | || | |||| | ||| |||||| | || Sbjct 1264 TCCATCCATTCAAATGGATTTTCAACTTAATAGTATTTTGGA-ACTCCTAGAGCGAAGAG 1206 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 | || ||||||||||| || |||||||||||||||| |||| || ||||| | Sbjct 1205 AAGTCTATCAGCTACAAACATAATGTACTGGCTCATGAGTTTTGAGTTCATACCAATGAG 1146 Query 4436 TCTCA-CAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 |||| | ||||| | | ||| ||| || |||| || ||||| || | ||| || | Sbjct 1145 -CTCAACTGGTAGTGACTCGCTCACAAATTCCAGTTCGATGGTTACAGCGTTTGTAATGA 1087 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAA-ACACGCA 4553 | || ||| | || || || |||||| |||| | ||| | ||| || Sbjct 1086 TCTCAAGGATTCTCTCATTGGAGATTTTATTGT-TAAGATGCTTGTAAATGAGACAAGCG 1028 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || ||| |||| |||||| ||||| || || || ||||| || || | ||| ||| Sbjct 1027 AAGTCAGTGTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAGTCCTGGC 968 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || | || | || || ||||| || || | || || |||||||||||||| || Sbjct 967 ATGAGTCCACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAATATACCC 908 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCAT 4733 || || | || || || |||| | |||| ||| ||| | || ||||||| Sbjct 907 TCAACTGAAGCGAAAGCAACTAGCCTTTCAGCGAA---GCTAGCTGTTTCACCAATCCAT 851 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAAT 4793 | |||||||| | || ||||| | || || || | || | || || ||||| Sbjct 850 CTCAATGCCCATTCTGCCTTTTTAGTGACAACTGGGATATTTTAGACGGCTTTGAATAAA 791 Query 4794 TTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853 | |||||| | ||| ||| |||| || ||||| ||| || ||||||| Sbjct 790 TATTCTTTTTCTTGAGCGTCACTAATCAAAGTATCAATTAGAAGGGAGTAGGTTTCAGAG 731 Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913 || || ||||| || |||| |||||||| || ||||||||||||| || |||| | Sbjct 730 TGGATGTTTTCCATCATCATCTAGAATCCGTAGAAACATCTAGCTTCTGGAACCTGAATT 671 Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 || | || ||||||| ||| ||| || ||||| ||||||||| || || ||||| Sbjct 670 TCAGTGCAGAATCTTTAGGCTAGGTTCTCATTTACAATACCGTCAGAAGCAGCGAAAAAG 611 Query 4974 GCCAAAACATG 4984 || | ||| || Sbjct 610 GCGAGAACGTG 600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426938308605539