Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq7827 86.0 5e-12 >seq7827 Length=2313 Score = 86.0 bits (94), Expect = 5e-12 Identities = 377/590 (64%), Gaps = 10/590 (2%) Strand=Plus/Plus Query 27145 GGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGT 27204 || || || |||| | ||| || ||||| ||||| || || |||||||| || Sbjct 770 GGCTCAACATGATTCTTGTAAACATGAGCATCTCCAAGAACATGTACAAACTCACCTCTC 829 Query 27205 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 27264 | || ||| ||| ||||| | ||| | || |||||||| || || || ||||||||| Sbjct 830 TTAAGTCCGCAGACTTGAGCAAGCATACAAGTAAGGAGAGAATAACTAGCAATGTTAAAG 889 Query 27265 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT---CCA 27321 ||||| || || |||||||| | ||||| || || | || || || |||| | || Sbjct 890 GGTACACCTAGACCCATGTCGCATGACCTTTGATACATTTGGCATGATAGCTTTTGATCA 949 Query 27322 TCGCTTACGTAAAACT--GACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGT 27379 | || || || || | | || | ||||| || ||||| ||||| | || Sbjct 950 GCACTCACATAGAATTAGGCCAAA--ATATGGCAAGGTGGAAGGGCCATTTTGTTTAAAG 1007 Query 27380 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCT-GGGTTGTTCCTGATGAGG 27438 || ||||||||| || | || | || | |||| || | || || || | || | Sbjct 1008 CTGCGGGGTTCCAAGCACTCATAACAATTCTCCTG-CTGGTAGGATTATTTTTTATTTGA 1066 Query 27439 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG 27498 | | ||| |||||||| | ||| | |||||| | |||| | | Sbjct 1067 TTTATAACGTCAGCAAGCTGATCGAATCCCTAGTTGGTGTAGTCATCATGCATGGTAGAG 1126 Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || || || || ||||| ||||||||||| || || || || || | ||| | ||||| Sbjct 1127 TAATCAGCCCCAAAATGTCTCCATTGGAAGCCATAGACAGGGCCTAAGTCCCATTCTTCT 1186 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 || | | || || | | || | ||| | ||| ||| | || | ||||| || || Sbjct 1187 CTTTCTTTGAGACCAATACTATCAAGAAACTGTCTTGAAGCATTTCCATCCCAAATTTTA 1246 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678 | ||| ||| || | ||| | || ||| ||| | | |||||| | || |||| Sbjct 1247 ATTTTCTTATCGCTAAGATGTTTAGCATTGGTGTCTCCTTTAATGAACCAAATCAACTCC 1306 Query 27679 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGA-GGGGAAACT 27727 || | || | |||| ||||| ||| || || || | |||||| || Sbjct 1307 TCGGCAACTCCTCTCCAGAAGACATCCTTTGTTGTAAGTATGGGGAAGCT 1356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369410904460673