Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq14392 280 2e-70 seq1421 255 8e-63 seq6928 251 1e-61 >seq14392 Length=2979 Score = 280 bits (310), Expect = 2e-70 Identities = 750/1130 (66%), Gaps = 26/1130 (2%) Strand=Plus/Plus Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 |||||| |||| |||||| || | || | ||| || |||||||| ||||| ||||| Sbjct 1112 TAAAAGCATAAGGGCATCAGCAAGACCTTAAACACCGATACCAATTGGTCTGTGTCTAAG 1171 Query 77546 ATTGGAAATTTTAGCTTC-TGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGAT 77604 || || |||| ||||| | | | |||||| | ||| || || ||| | || |||| Sbjct 1172 GTTAGAGTTTTTGGCTTCATCGCA-AGGATAGAAGTTACCATCAATGATTCTGTTAAGAT 1230 Query 77605 TTCTAACAACTACTTTAACC-ACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATA 77663 ||||| || || || || | |||||| | | ||||| ||||| || Sbjct 1231 TTCTAGTAA-TAGAATAGGTGACTGAATGTAGTTTCTCATAGTCAAACACTCCATTATTA 1289 Query 77664 ACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA 77723 ||| | || || | ||| || || || || ||||| ||||| |||| || | Sbjct 1290 ACATATCTGGGTAATGATATGGAGGCGAGGTTGCAAACAGCTACTTCATCAGGTGAAGTG 1349 Query 77724 TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTG 77783 |||| || || ||| ||| |||||| || || || || || ||||||| ||| ||| Sbjct 1350 TATTCAATGATTTCGCAACAGAGATTAGAACTCTTAATGGTACCGAGATTTTTTTGATTG 1409 Query 77784 CTCTTTTTATT-GCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 || || || || || |||||| ||||| ||| | ||||| ||||||||||| | Sbjct 1410 GATTTATTGTTTGCGTG-GTCCTTGTAAAGCATATAGGGAGTACCGGTTTCAATTTAACT 1468 Query 77843 TTCGATAATAGATTTCCAGACGACTC-TAGCTTTTATCATAGATTTGTATCGCC---TCT 77898 ||| ||||||| | ||| | | || | |||||||| | | ||||| | Sbjct 1469 TTCAATAATAGTCTCCCAAA-GTTTCATGGCTTTTATGGTC------TTTCGCCCAATAC 1521 Query 77899 CT---CTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATC 77955 || |||||||||| ||| || || ||| || |||| || | ||||||| | || Sbjct 1522 CTTAGCTTTCATATTTAGTGTAAAGAGCTTCGAAGGCATCACCATAGACATCATAGAGTC 1581 Query 77956 CAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAA 78015 | |||||| ||||| | | || ||| ||||| | || | |||| ||||||| Sbjct 1582 CCTTAGCTTCATTAGGGCAGAAGAGTGTCCAATCACCGTTATCTCTGACTCTCTTCATAA 1641 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTG 78075 | ||||| || ||||| || ||| || ||||||| | ||| | |||||| || || Sbjct 1642 ATAGATCTGGGATCCAAAGGGCATAGAAAAGATCTCTAGCTCTTTATTCTTCCTTACCGT 1701 Query 78076 TATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTG 78135 ||||||||| || | || || || | || ||| | ||||||||||| ||||| || | Sbjct 1702 GATTCTTTTTTAGTTGAAGGAAATCAAAAACATCTGCGTGCCATGGTTCAAGATAGATAG 1761 Query 78136 CCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAA 78195 | | || || || ||| || || || | ||||| || || | ||| | | Sbjct 1762 CGAATGAACCCTTTCTCTTTCCACCACCTTGGTCAACGTATCTAGCAGTTTCATTGAATA 1821 Query 78196 CTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCAC 78255 |||| | ||| || | || ||| || || |||||| || || ||||| || ||| Sbjct 1822 CTCTAAGCATGGGGACAAGACCATTGGAGTGTCCATTAGTACCCTTGATATAGCTGCCAG 1881 Query 78256 TTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGC 78315 | || | ||||||| || | | || | |||||| || |||| || || ||| || Sbjct 1882 TAGCTCTAATATTATGAACAGCAAGTCCGACTCCTCCAGCACTCTTTGAGATAAGA--GC 1939 Query 78316 AACGT--TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCAT-GTTAAGAAGAA 78372 || || || | ||||| ||||| || | || |||||| |||| | || ||| | Sbjct 1940 AATGTTCTTAAGAGTATCATAGATTCCATGAATTGAATCATCCTTCATCATCAATAAG-A 1998 Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432 ||||||| ||||| | | | | || |||||||| |||| || || | || || | Sbjct 1999 AACAGCTGCTCATTTAAGGCTTAGGGGTACCTGCATTGAATAGAGTAGGTGTGGCGTGGG 2058 Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGAT 78492 |||||||||| ||| | || || || || |||||||| | || || || | || Sbjct 2059 TAAACCATTTGTCACTCATAAGGTTATAGGTCTCAATAGCGGCATCAATATCTTCCTTAT 2118 Query 78493 GAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTA 78552 | || || || | || | ||| | ||||||||| ||||||||||| |||| || | Sbjct 2119 GGATACCAACTGAGACTCTCATTAGCATATGCTGTGGTCTTTCAACGATCTTGGAGTTGA 2178 Query 78553 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 78602 || | ||| || ||| | || | || |||||||| ||||| | |||| Sbjct 2179 CCTTGAGCAAATAGGATCTCTCAAGGGTCTTAAAACCGAAATAATCGTAT 2228 >seq1421 Length=1529 Score = 255 bits (282), Expect = 8e-63 Identities = 593/889 (67%), Gaps = 10/889 (1%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || || || || | |||||||| || || |||||||| ||||| || | Sbjct 1324 TTTTGGTACTCTCCTACTCTCTTCTCGAAGAAGTTTGTTTTGCCAGTTAATGAGATCATG 1265 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| | ||||||||||| | | | ||| |||| || ||||| | | | Sbjct 1264 TCCATCCATTCAAATGGATTTTCAACTTAATAGTATTTTGGAACTCCTAGAGCGAAGAGA 1205 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 |||||||| || || || || || |||| | || | ||||| || || || Sbjct 1204 AGTCTATCAGCTACAAACATAATGTACTGGCTCATGAGTTTTGAGTTCATACCAATGAGC 1145 Query 48030 TTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATC 48089 | ||||||||| | ||| | | ||| || ||||||| || ||||| | | | || Sbjct 1144 TCAACTGGTAGTGACTCGCTCACAAATTCCAGTTCGATGGTTACAGCGTT---TGTAAT- 1089 Query 48090 GATGTTACCGTTTC-CTCACTTGGTGGATACAAC----AAATGTTTAAACATTAAACATG 48144 ||| | | | ||| |||| |||| | | | | ||| || | || | ||| | Sbjct 1088 GATCTCAAGGATTCTCTCA-TTGGAGATTTTATTGTTAAGATGCTTGTAAATGAGACAAG 1030 Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 | || ||| || | ||||||||||||| || | || ||||| || || || || | Sbjct 1029 CGAAGTCAGTGTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAGTCCTG 970 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||| ||||||||||| |||||||| || |||| |||||| |||||||||||||| | Sbjct 969 GCATGAGTCCACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAATATAC 910 Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATCCACC 48324 | || || | || || || || || || || | || ||| | ||||| | Sbjct 909 CCTCAACTGAAGCGAAAGCAACTAGCCTTTCAGCGAAGCTAGCTGTTTCACCAATCCATC 850 Query 48325 GTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 48384 |||||| || ||||| || | ||| || || ||| | || || || | | Sbjct 849 TCAATGCCCATTCTGCCTTTTTAGTGACAACTGGGATATTTTAGACGGCTTTGAATAAAT 790 Query 48385 AGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGT 48444 | | |||||| | || ||| ||||||| |||| ||| || |||| |||| Sbjct 789 ATTCTTTTTCTTGAGCGTCACTAATCAAAGTATCAATTAGAAGGGAGTAGGTTTCAGAGT 730 Query 48445 GAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCT 48504 | || ||||| || ||||| |||||||| |||||||| ||||||| | ||| | | Sbjct 729 GGATGTTTTCCATCATCATCTAGAATCCGTAGAAACATCTAGCTTCTGGAACCTGAATTT 670 Query 48505 CCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATG 48564 | || || |||| || || | ||||||||||| || || ||| |||||| ||||| | Sbjct 669 CAGTGCAGAATCTTTAGGCTAGGTTCTCATTTACAATACCGTCAGAAGCAGCGAAAAAGG 610 Query 48565 CTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATAT 48624 | | || ||||| || || | | | |||||| | ||| | | |||||| || | || Sbjct 609 CGAGAACGTGTTTGATGAAGTGTCTCTCGTTGTCGTTGAGTCTCTCCCAGTCTTTAACAT 550 Query 48625 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATAT 48684 || | | | ||| | ||| || | |||||| |||| |||| | | ||| ||||| | Sbjct 549 CTGTGGCAAGATCGATTTCCTCTGATGTCCAGAATGCTGCCATTTAATCTTTGTACATTT 490 Query 48685 TCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATT 48733 |||| |||||| | |||| |||||| || || |||||||| || || || Sbjct 489 TCCAGATATCATTATATTTGATTGGCAAGATCACAAATCTGTTAGGGTT 441 >seq6928 Length=2931 Score = 251 bits (278), Expect = 1e-61 Identities = 745/1129 (66%), Gaps = 31/1129 (3%) Strand=Plus/Plus Query 77130 AATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 77189 ||||| |||| || ||||| | ||||||| ||| ||| || || || | || ||| Sbjct 773 AATTCACCAGCTAAGACTCTTCTGGTGTAAACATTTGAGGTGTAAGGCTCAAAAGTCTCA 832 Query 77190 TTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTT 77249 |||||||| | ||||||| ||| || || |||||||| ||||| | || | ||| Sbjct 833 TTGTTTCCAAGGATTTGAGAAGTTGAGGCTGTTGGCATGGGTGCTAATAAGAGTGAGTTT 892 Query 77250 CTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA---A 77306 || ||||| | | ||| | | | | || || | |||||| | ||| || | Sbjct 893 CTAGCACCATATTTCATGACATCCTGTCTAAGTTAATCCCAATCATATCTATCAGAGCAA 952 Query 77307 GGTACAACATCCCAAAGATCGTATTGTAGAATT--CCGTTAC-TAGCATATGATCCATTA 77363 ||| ||||| || || ||| |||||| || | | ||| |||||| | Sbjct 953 GGTTTCTTTTCCCAGAGGTCAAATT--AGAATTTACCTTGAGATAGTGG-TGATCCTTGG 1009 Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 | ||||||||||||||||| || ||| | ||| | ||||||| | | | | Sbjct 1010 AAGGTTTCATAAGGTCCTTCAACTTTAGCGATTTCCATAGAGGCTTCCATGGAGGCATGA 1069 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG-TGCTTCAATACTATCAAACGGATA 77482 || || ||||| || || || |||||| ||| ||||| | | || || || || Sbjct 1070 TAGATAGTTTCAAAGATTAACTCATTGAG-TCTCAATGCTTTAGGATCTTCGAATGG-TA 1127 Query 77483 ATGTAAAAGAATA---AAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATG 77539 | | | | || || ||||| || ||||| ||||| || |||||||| |||||||| Sbjct 1128 TTTTGA--GCATTTGTAATGCATCAGCGAATCCTTGAACACCGATACCAATTGGTCTATG 1185 Query 77540 TCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATT 77599 ||| ||| || ||||||||| | ||| ||||| | ||| | || ||||||||||| Sbjct 1186 TCTAAGATTAGAGTATTTAGCTTCAGCAATTGGATAGTGATTGTTATCAATAATTTTATT 1245 Query 77600 GAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAAT-CTTCC-- 77656 || ||| | || | || || | | || || | ||||| || ||| Sbjct 1246 AAGGTTTTTTGTAATTCTCTTGGTTACATAGTGTAACTTCTCATAATCATATTCTTAGGT 1305 Query 77657 ATCT---ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATT 77713 |||| || || || | || | || || ||||| | || |||||||||| || | Sbjct 1306 ATCTTTTATGACGAATCTATTAAGTGCAATGGATGCCAAGTTGCAAACTGCTATTTCGTC 1365 Query 77714 AGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATT 77773 | ||| || | | ||| || ||||| ||||| | || || || || || || Sbjct 1366 GGGACTGGTGTACTCCACTATTTCAGTACAGAGATTGGAGCTCTTAATGGTTCCTAGGTT 1425 Query 77774 TTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTC 77833 || |||||| |||| ||||||| | || || || || || | || || || ||||| Sbjct 1426 TTATTGGTTTGACTTTCTATTGCAGGTATCTTTGTAGAGCATGTAGGGGGTTCCAGTTTC 1485 Query 77834 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGA-TTTGTATC 77892 |||| ||||| | || |||||| ||| || || || || ||| || | Sbjct 1486 TATCTAAGATTCTACGATTTGACTCCAGAGCCATCTTGCCTTAATG---GACTTTCTACC 1542 Query 77893 GCCTC--TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950 | || ||||||||||||| ||| || |||||| || | |||||| || | Sbjct 1543 TCTTCCATCTCTTTCATATTACTCATAGAGGTTTTCAAACTCCTATCCCCAGCAATTACT 1602 Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010 ||| || |||||||| || || ||||||| | |||||| ||| | || |||| ||| Sbjct 1603 CAAACCTGGGCATTCGTTGGGACACATCAGGGTCCAGTCTTCATTCTTCTCGACTCTTTT 1662 Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || ||||| |||||||| || || ||| ||||||| || ||| | ||| || || Sbjct 1663 CATGAAAAGATCTGGTATCCAAAGTGCGTAAAAGAGATCTCTGGCTCTGTTTTCCTCCTT 1722 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATA-ATATCAGAATGCCATGGTTCTAGAT 78129 || ||||||| | || | ||| || | |||| ||||| | |||||||| || | || Sbjct 1723 ACCATGATTCTTTCTCAGTTAGAGGAAGT-CATAGATATCTGCGTGCCATGGCTCCACAT 1781 Query 78130 ATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 | | || | |||| || |||| ||| || ||||| | |||||| || |||| || Sbjct 1782 AGACAGCAAACGCTCCCTTTCTTTTACCACCACCTTGATCAACATATCTTGCAGTGTCAT 1841 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCC 78238 || | || | | ||| ||||| | ||| || || ||||||||| || Sbjct 1842 TAAATACCTTAAGCATGGGAATTAAACCATTTGAATATCCATTTGTACC 1890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694483123713120