Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1421 251 1e-61 seq14392 248 1e-60 seq6928 241 2e-58 >seq1421 Length=1529 Score = 251 bits (278), Expect = 1e-61 Identities = 602/907 (66%), Gaps = 10/907 (1%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || ||||| | |||||||| || || |||||||| ||||| || | Sbjct 1324 TTTTGGTACTCTCCTACTCTCTTCTCGAAGAAGTTTGTTTTGCCAGTTAATGAGATCATG 1265 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| | ||||| ||||| ||| | ||| |||| || ||||| | | | Sbjct 1264 TCCATCCATTCAAATGGATTTTCAACTTAATAGTATTTTGGAACTCCTAGAGCGAAGAGA 1205 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 |||||||| || || || || ||| |||| | || | ||||| || ||||| Sbjct 1204 AGTCTATCAGCTACAAACATAATGTACTGGCTCATGAGTTTTGAGTTCATACCAATGAGC 1145 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 | || ||||| | ||| | | ||| || |||| || || ||||| | | || ||| Sbjct 1144 TCAACTGGTAGTGACTCGCTCACAAATTCCAGTTCGATGGTTACAGCGTTTGTAATGATC 1085 Query 46579 GATGTTACTGTTTC-CTCACTTGGTGGATGCATC----AAATGTTTAAACATTAAACATG 46633 | | | ||| |||| |||| | | || | ||| || | || | ||| | Sbjct 1084 ----TCAAGGATTCTCTCA-TTGGAGATTTTATTGTTAAGATGCTTGTAAATGAGACAAG 1030 Query 46634 CAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAG 46693 | || ||| || | |||||||||||| || | || ||||| || || || || | Sbjct 1029 CGAAGTCAGTGTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAGTCCTG 970 Query 46694 GCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGC 46753 |||| |||||||| || |||||||| || || | |||||| |||||||||||||| | Sbjct 969 GCATGAGTCCACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAATATAC 910 Query 46754 CTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCACC 46813 | || || | ||||| || || || || || || | || || | | |||||| | Sbjct 909 CCTCAACTGAAGCGAAAGCAACTAGCCTTTCAGCGAAGCTAGCTGTTTCACCAATCCATC 850 Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 46873 | ||||| || |||||||| | ||| || || ||| | || || || | | Sbjct 849 TCAATGCCCATTCTGCCTTTTTAGTGACAACTGGGATATTTTAGACGGCTTTGAATAAAT 790 Query 46874 AGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAAT 46933 | | |||||| | | || ||| | ||||| |||| ||| || |||| || | Sbjct 789 ATTCTTTTTCTTGAGCGTCACTAATCAAAGTATCAATTAGAAGGGAGTAGGTTTCAGAGT 730 Query 46934 GAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCT 46993 | |||||||| || ||||| |||||||| |||||||| ||||| | || ||| | | Sbjct 729 GGATGTTTTCCATCATCATCTAGAATCCGTAGAAACATCTAGCTTCTGGAACCTGAATTT 670 Query 46994 CTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053 | || || |||| || | | |||||||| || || || ||| |||||| ||||| | Sbjct 669 CAGTGCAGAATCTTTAGGCTAGGTTCTCATTTACAATACCGTCAGAAGCAGCGAAAAAGG 610 Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATAT 47113 | | || ||||| || || | | | || | | | ||| | | |||||| || | || Sbjct 609 CGAGAACGTGTTTGATGAAGTGTCTCTCGTTGTCGTTGAGTCTCTCCCAGTCTTTAACAT 550 Query 47114 CTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATAT 47173 || | | | ||| | ||| || | ||||||||||| ||| | | ||| ||||| | Sbjct 549 CTGTGGCAAGATCGATTTCCTCTGATGTCCAGAATGCTGCCATTTAATCTTTGTACATTT 490 Query 47174 TCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTA 47233 |||| |||||| ||||| ||| || || || |||||||| || || || | | | | || Sbjct 489 TCCAGATATCATTATATTTGATTGGCAAGATCACAAATCTGTTAGGGTTCTCTTCCAATA 430 Query 47234 TAGGTTC 47240 ||||| Sbjct 429 GTGGTTC 423 >seq14392 Length=2979 Score = 248 bits (274), Expect = 1e-60 Identities = 748/1132 (66%), Gaps = 30/1132 (3%) Strand=Plus/Plus Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 |||||| |||| ||||| || || || | ||| || |||||||| ||||| ||||| Sbjct 1112 TAAAAGCATAAGGGCATCAGCAAGACCTTAAACACCGATACCAATTGGTCTGTGTCTAAG 1171 Query 76141 ATTGGAAATTTCAGCTTC-TGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGAT 76199 || || ||| ||||| | | | ||| || | ||| ||| || ||| | || |||| Sbjct 1172 GTTAGAGTTTTTGGCTTCATCGCA-AGGATAGAAGTTACCATCAATGATTCTGTTAAGAT 1230 Query 76200 TTCTGACAACTACTTTAACC-ACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATC 76258 |||| || || || || | |||||| | | ||||| ||||| ||| Sbjct 1231 TTCTAGTAA-TAGAATAGGTGACTGAATGTAGTTTCTCATAGTCAAACACTCCAT-TATT 1288 Query 76259 ACAAACATAT-----TAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCAT 76313 | |||||| ||| | ||| || || || || ||||| ||||| |||| || Sbjct 1289 A---ACATATCTGGGTAAT-GATATGGAGGCGAGGTTGCAAACAGCTACTTCATCAGGTG 1344 Query 76314 TGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTT 76373 | |||| || || || || |||||| || ||| || || || ||||||| || Sbjct 1345 AAGTGTATTCAATGATTTCGCAACAGAGATTAGAACTCTTAATGGTACCGAGATTTTTTT 1404 Query 76374 GGTTGCTCTTTTTGTTA-CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 | ||| || ||||| | || |||||| ||||| | | | ||||| || |||||||| Sbjct 1405 GATTGGATTTATTGTTTGCGTG-GTCCTTGTAAAGCATATAGGGAGTACCGGTTTCAATT 1463 Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTC-TAGCTTTTATTATAGATTTGTATCGCTT 76491 | ||| ||||||| | ||| | | || | |||||||| | ||| | | Sbjct 1464 TAACTTTCAATAATAGTCTCCCAAA-GTTTCATGGCTTTTATGGTC--TTTCGCCCAATA 1520 Query 76492 CTCT--CTTTCATATT--GTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCA 76547 | | |||||||||| ||||| | | | ||| || |||| || | ||||||| | Sbjct 1521 CCTTAGCTTTCATATTTAGTGTAAAGAGC--TTCGAAGGCATCACCATAGACATCATAGA 1578 Query 76548 AACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCA 76607 || | |||||| || || | | || ||| ||||| | || | || | |||| Sbjct 1579 GTCCCTTAGCTTCATTAGGGCAGAAGAGTGTCCAATCACCGTTATCTCTGACTCTCTTCA 1638 Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTC 76667 |||| ||||| || ||||| || ||| || ||||||| | ||| |||||| || | Sbjct 1639 TAAATAGATCTGGGATCCAAAGGGCATAGAAAAGATCTCTAGCTCTTTATTCTTCCTTAC 1698 Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727 | ||||||||| || | ||||| || | || ||| | ||||||||||| ||||| | Sbjct 1699 CGTGATTCTTTTTTAGTTGAAGGAAATCAAAAACATCTGCGTGCCATGGTTCAAGATAGA 1758 Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787 | || | |||| || || ||| || || || | ||||| ||||| | ||| Sbjct 1759 TAGCGAATGAACCCTTTCTCTTTCCACCACCTTGGTCAACGTATCTAGCAGTTTCATTGA 1818 Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGA-TGTACCATTTGTTCCAGAAATATAACTT 76846 | ||||| | ||| || | || || || || ||| ||||| || || ||||| || Sbjct 1819 ATACTCTAAGCATGGGGACAAGACCATTGGAGTGT-CCATTAGTACCCTTGATATAGCTG 1877 Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906 ||| || | ||||||| || || || || | |||||| || | || ||||| ||| Sbjct 1878 CCAGTAGCTCTAATATTATGAACAGCAAGTCCGACTCCTCCAGCACTCTTTGAGATAAGA 1937 Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGAAG 76965 ||| | || | || |||||||| || | || ||||||| |||| | || ||| Sbjct 1938 GCAATGTTCTTAAGAGTATCATAGATTCCATGAATTGAATCATCCTTCATCATCAATAAG 1997 Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 |||||||| ||||| | | | | || |||||||| || | ||||| | || || Sbjct 1998 -AAACAGCTGCTCATTTAAGGCTTAGGGGTACCTGCATTGAATAGAGTAGGTGTGGCGTG 2056 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 || |||||||| ||| | || || || || |||||| | || || ||||| | Sbjct 2057 GGTAAACCATTTGTCACTCATAAGGTTATAGGTCTCAATAGCGGCATCAATATCTTCCTT 2116 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 ||| || || || | ||| | ||| | ||||||||| |||| ||| || |||| || Sbjct 2117 ATGGATACCAACTGAGACTCTCATTAGCATATGCTGTGGTCTTTCAACGATCTTGGAGTT 2176 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197 | || | ||| || ||| | || | || |||||||| ||||| | |||| Sbjct 2177 GACCTTGAGCAAATAGGATCTCTCAAGGGTCTTAAAACCGAAATAATCGTAT 2228 >seq6928 Length=2931 Score = 241 bits (266), Expect = 2e-58 Identities = 998/1544 (65%), Gaps = 53/1544 (3%) Strand=Plus/Plus Query 75704 AGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTG 75763 || |||||||| ||| ||||| |||| || ||||||| ||||||| ||| | Sbjct 752 AGGTGAGGATTCACACAAACGAATTCACCAGCTAAGACTCTTCTGGTGTAAACATTTGAG 811 Query 75764 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATA 75823 || || || || | || ||||||||||| | ||||||| |||||| || || ||||| Sbjct 812 GTGTAAGGCTCAAAAGTCTCATTGTTTCCAAGGATTTGAGAAGTTGAGGCTGTTGGCATG 871 Query 75824 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 75883 ||||| | || | ||||| ||||| | | ||| | | | | || || | | Sbjct 872 GGTGCTAATAAGAGTGAGTTTCTAGCACCATATTTCATGACATCCTGTCTAAGTTAATCC 931 Query 75884 CAATCCCAAAGATCTGAT---GGTACAACATCCCAGAGATCGTATTGTAGAATTC-CGTT 75939 ||||| | ||| || ||| |||||||| || ||| |||||| | || Sbjct 932 CAATCATATCTATCAGAGCAAGGTTTCTTTTCCCAGAGGTCAAATT--AGAATTTACCTT 989 Query 75940 GCTAGCATA----TGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGC 75995 | || ||| |||||| | | ||||| |||| || || || ||| | ||| Sbjct 990 G--AG-ATAGTGGTGATCCTTGGAAGGTTTCATAAGGTCCTTCAACTTTAGCGATTTCCA 1046 Query 75996 AACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC- 76054 | || || | | | | ||| || ||||| || || || ||| || ||| Sbjct 1047 TAGAGGCTTCCATGGAGGCATGATAGATAGTTTCAAAGATTAACTCATTGAG-TCTCAAT 1105 Query 76055 GCTTCAAGACTATCAAAAGGATAATGTAAAAGAATA---AATGCATCTGCTAGTCCCTGA 76111 |||| | || || || || || | | | | || |||||||| || | ||| ||| Sbjct 1106 GCTTTAGGATCTTCGAATGG-TATTTTGA--GCATTTGTAATGCATCAGCGAATCCTTGA 1162 Query 76112 ACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAA 76171 || || |||||||| ||||||||||| ||| || || |||||| | ||| || || Sbjct 1163 ACACCGATACCAATTGGTCTATGTCTAAGATTAGAGTATTTAGCTTCAGCAATTGGATAG 1222 Query 76172 TAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGT 76231 | ||| |||| ||||||||||| || ||| | || | || || | | || Sbjct 1223 TGATTGTTATCAATAATTTTATTAAGGTTTTTTGTAATTCTCTTGGTTACATAGTGTAAC 1282 Query 76232 TTGAGAAAATCAAATTTTCC---ATCT---ATCACAAACATATTAAGAGCTATAGATGCT 76285 || | ||||| ||| | |||| || || || ||||||| || || ||||| Sbjct 1283 TTCTCATAATCATATTCTTAGGTATCTTTTATGACGAATCTATTAAGTGCAATGGATGCC 1342 Query 76286 AGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTA 76345 | || ||||| |||| || | | | ||| || | | ||| || || || ||||| Sbjct 1343 AAGTTGCAAACTGCTATTTCGTCGGGACTGGTGTACTCCACTATTTCAGTACAGAGATTG 1402 Query 76346 CTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAA 76405 | ||| || ||||| || |||| |||||| |||| | || || | || || || Sbjct 1403 GAGCTCTTAATGGTTCCTAGGTTTTATTGGTTTGACTTTCTATTGCAGGTATCTTTGTAG 1462 Query 76406 AGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA 76465 || | | || ||||||||||| |||| ||||| | || |||||| ||| Sbjct 1463 AGCATGTAGGGGGTTCCAGTTTCTATCTAAGATTCTACGATTTGACTCCAGAGCCATCTT 1522 Query 76466 GCTTTTATTATAGA-TTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCA 76522 || || || || ||| || | |||| ||||||||||||| ||| | |||| Sbjct 1523 GCCTTAATG---GACTTTCTACCTCTTCCATCTCTTTCATATTACTCATAGAGGTTTTCA 1579 Query 76523 AATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCAC 76582 || || | |||||| || | |||||| || ||||| || |||||||||| | ||| Sbjct 1580 AACTCCTATCCCCAGCAATTACTCAAACCTGGGCATTCGTTGGGACACATCAGGGTCCAG 1639 Query 76583 TCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 76642 || ||| | || || | |||||| || ||||| |||||||| || || ||| ||| Sbjct 1640 TCTTCATTCTTCTCGACTCTTTTCATGAAAAGATCTGGTATCCAAAGTGCGTAAAAGAGA 1699 Query 76643 TCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA-AT 76701 |||| || ||| ||| || || || ||||||| | || | ||||| | |||| || Sbjct 1700 TCTCTGGCTCTGTTTTCCTCCTTACCATGATTCTTTCTCAGTTAGAGGAAGT-CATAGAT 1758 Query 76702 ATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTG 76761 ||| | |||||||| || | ||| | || | | ||| || |||| ||| || || Sbjct 1759 ATCTGCGTGCCATGGCTCCACATAGACAGCAAACGCTCCCTTTCTTTTACCACCACCTTG 1818 Query 76762 ATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGT 76821 ||| | |||||| ||||||| |||| | || | | ||| ||||| | || || || Sbjct 1819 ATCAACATATCTTGCAGTGTCATTAAATACCTTAAGCATGGGAATTAAACCATTTGAATA 1878 Query 76822 ACCATTTGTTC--CAGAAATATAACTTCCACATGCACGAATATTACTAAT--AGATAGGC 76877 |||||||| | | || ||| | | | || | || | || || ||| | | Sbjct 1879 TCCATTTGTACCTCTGATGTATGAAT--CTGCGGCTCTGATGT--CTGATACAGAGACAC 1934 Query 76878 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCT 76937 | || ||||| || || ||||| | |||| || | ||| ||| |||| || | Sbjct 1935 CGATACCTCCAGCTGCCTTTGAGATGACAGCAATCTACTTGAGTGTTTCAAAGATTCCAT 1994 Query 76938 CTATACTATCATCCATCAT-GTTAAGAAGAA--AACAGCTAGACATTTGATGATGAACAG 76994 | || ||| ||| |||| ||||| ||||| || | || ||| || | | || Sbjct 1995 CAATTGAATCCTCCTTCATGGTTAATAAGAAGCAAGAACT---CATCTGTGGTTTTGGAG 2051 Query 76995 TTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGT 77054 | |||| || ||||| ||||||| || || |||||||| || | | |||| || Sbjct 2052 TACCTGAGTTGAACAAAGTAGGAGTGGCGTGTGTGAACCACAATTGACTCATAAGATCGT 2111 Query 77055 ATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 | || || | ||| || | ||| | ||| ||||| || | | ||| | ||| | | Sbjct 2112 AGGTCTCGAATGCTGACTCGAGATCTTCCTTG-TGAATACCAATACTGACTCTCATAAGC 2170 Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATTATTTAT-TTTCAACAAGTATGATTTTTCCAA 77172 || || | ||||| ||| | |||| | || |||||| | || | | ||||||| Sbjct 2171 ATGTGTTAAGGTCTTTCAATGATCTT-GGCTCCATCTTTCAAAAGATAAGCTCTTTCCAA 2229 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAA 77216 ||| | || ||||| || | ||| ||||||| ||||||| Sbjct 2230 TGTTCTGAATCCAAAGTAATCGTAGTTGTAGTCTCTATCGTAAA 2273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712743841546560