Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq16706 141 2e-28 seq6006 120 7e-22 seq19055 96.9 8e-15 >seq16706 Length=515 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 |||||||| | ||| | ||||| |||||||| || || |||||||| || | | |||| Sbjct 171 CTGAGTCTCAAGACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCTGAAAGAGTT 230 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || |||||||| || ||| || || |||||||| || || || || | | ||| ||| Sbjct 231 CTTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGTCTTTGTTGATCGGGTGGGATACCT 290 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || ||||| ||| |||||| | || | |||| || ||| || |||||| Sbjct 291 TCCTTGTCCTGAATCTTTGCTTTGACGTTTTCAATTGTGTCAGATGGCTCAACGTCAAGA 350 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || |||||||| ||||||| ||||| Sbjct 351 GTAATGGTCTTTCCAGTAAGAGTCTTGACGAAGATTTGCAT 391 >seq6006 Length=2920 Score = 120 bits (132), Expect = 7e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | ||| | |||||||| || |||||||||||||||||||| | || ||| Sbjct 2595 CTAAGTCTTAAGACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAATCAGACAAGGTT 2654 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || ||||| | || || || ||||| || || || || || | | ||| ||| Sbjct 2655 CTTCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTTTGTTGATCGGGGGGGATACCT 2714 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || |||||||| || || || | || | | | || || ||| || || ||| Sbjct 2715 TCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCAGAGGGCTCGACATCGAGA 2774 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||||||| || ||||| | |||||| ||||| | || |||||| Sbjct 2775 GTAATAGTCTTACCCGTCAAAGTCTTGACGAATATCTACATTTT 2818 >seq19055 Length=771 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | || || || || || || || ||||||||||| | ||||| || Sbjct 207 TCTAAGGACTAAGTGGAGGGTTGATTCCTTCTGAATGTTGTAATCACTGAGTGTTCTACC 266 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 || |||| ||| || |||||||| | ||||| || || | | |||||||||||| Sbjct 267 GTCCTCTAATTATTTACCAGCGAAGATCAATCTCTGTTGATCGGGAGGGATTCCTTCCTT 326 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || | ||| || |||||| |||| | |||| || || || || ||||| || Sbjct 327 GTCCTAAATCTTGGCTTTGACGTTCTCGATAGTGTCAGATGGTTCAACGTCGAGAGTGAT 386 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||| || |||| |||||| Sbjct 387 GGTCTTACCGGTGAGGGTCTTTACAAAGATCTGCAT 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153504688075993