Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq29984 244 1e-59 seq17286 185 1e-41 seq11536 125 8e-24 >seq29984 Length=2719 Score = 244 bits (270), Expect = 1e-59 Identities = 778/1184 (66%), Gaps = 27/1184 (2%) Strand=Plus/Minus Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 53509 || || || |||||||||||||| || ||| ||||| || ||||||||| | Sbjct 1785 TAGATAGTCTCGAAGATCTTCTTGTTAGCATCGGTAGCTTCTTCACTCTCAAATGGA-AT 1727 Query 53510 TTTAAGAGAATAA-ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 53568 ||| | | | | || || |||||||||||||||||||| || |||||||| | ||| Sbjct 1726 TTTCATTCTTTGATAAGCATCAGCTAATCCTTGAACACCAATTCCAATAGGTCTGTTTCT 1667 Query 53569 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 53628 || || ||||||||| || || || ||||| ||| | || |||| | |||| | Sbjct 1666 AAAGTTCGAATATTCAGCTTCAGGGATTGGGTAATAGTTATTGTCAATAACTCTATTCAA 1607 Query 53629 GTTTCTGACAAT--TACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCT 53686 || || ||| | ||| | || | | || || | |||| || ||| || Sbjct 1606 ATTCTTGGTAATAGTCCTTGTAACAGAG--TGAAGCTTTTCATAATCGAAGACTCCTTCA 1549 Query 53687 --ATT-ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCA 53743 ||| || ||| | || | |||||||||||| || || || ||||| | || | Sbjct 1548 TCATTGACGAACCTTACTAAAGAAATAGATGCCAGGTTGCAGACAGCTACTTGATCTTTA 1489 Query 53744 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 53803 || | ||||| || | |||| ||||||||| | ||||| ||||| | ||| ||| Sbjct 1488 TCAGTATATTCCATAACCTCACAGCAAAGATTCGAGCTTTTGATAGTTCCAAGATTCTGT 1429 Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 |||||| || ||||| | |||||||| || ||| |||| || || |||||| Sbjct 1428 TGATTAGATTTCTTGTTGGCAGAGTCCTTATAGAGCATGTATGGAACCCCTGTCTCAATC 1369 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACAC-GAGCCTTTATTATAGATTTGTATCTCTT 53922 |||||||| ||||| || ||||| | || | | ||||| ||| | ||| | || ||| Sbjct 1368 TGGGATTCAATAATAGCATTCCA-AAGATGCTGCGCCTTGATT---GTTTTCTTTC-CTT 1314 Query 53923 TTC--TCTT--TCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATT-GTCC 53977 | | |||| || ||| ||||| | | ||| || || || |||| | |||| | Sbjct 1313 TGCCTTCTTGCTCATATTTAGTATAAAGTGTTTCGAATTCTTCACCCC-AGCATTCAAAC 1255 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 ||||| ||||||| | ||||| | | | ||| || || || |||| |||| ||| Sbjct 1254 AATCCTGGACATTGGTTTGGACAAAAGAGGGTCCAGTCACCATCTTCCTCAACTCTCTTC 1195 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTT 54096 || || | |||| | ||||||||| ||| || | ||||| | ||| | ||| || || Sbjct 1194 ATGAACAAATCACAGACCCAAAGAGC-ATAGAACAAGTCTCTTGCTCTGTTTTCTTCTTT 1136 Query 54097 TCCTGTATTCTT-TTTAAGATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAG 54154 || ||||| ||||| || | || |||| || || | ||||| ||||| | Sbjct 1135 ACCATGGTTCTTCTTTAAACTCAA--AAACTCATAGATGTCTGCGTGCCAAGGTTCGAGA 1078 Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214 || | || | | |||| | || ||||| || || | |||||||| ||||| Sbjct 1077 TAGACGGCAAAAGCTCCTTTTCTCTTACCACCTCCTTGGTCGACATATCTAGCAGTGTTG 1018 Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274 ||||| || || | |||||| | | ||||| || ||||| || || ||| ||| Sbjct 1017 TTATAGACCCTGAGCATTGGGACTACTCCATTAGAGATTCCATTAGTGCCTCTGATGTAG 958 Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 | || | || | || | || || || || ||||| | |||||||| Sbjct 957 GAGGATGTAGCTCTGATGCAATGGATAGCAAGTCCAATACCACCTGCGTTCTTAGAGATA 898 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394 | || || |||| | || |||||||| || || ||| ||| || ||| |||| Sbjct 897 ATGGCACACTGTTTGAGAGTGTCATAGATTCCTTCAATAGAATCCTCTTGCATCGCAAGT 838 Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454 | ||| || | |||||| | |||||| | |||||| | || || || || Sbjct 837 AAAAAGCACGAACTCATTTGTGGTTTGGGAGTTCCTGAATTAAACAGAGTGGGGGATGCA 778 Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCAT 54514 || || |||||||| | | | | || ||| ||||| | ||| || |||| |||| Sbjct 777 TGAGTGAACCATTTATTACTCATCAAATCGTAAGTCTCAAAAGCAGACTCTAGATCCTTC 718 Query 54515 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 54574 | ||| ||||| | | || | ||| ||||| || ||||| |||| |||||||| Sbjct 717 TTATGGATTCCGATAGACACTCTCATCAACATTGTTTGTGGTCTCTCAATGATCTTGTCA 658 Query 54575 TTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618 | | ||| || ||||| ||| | || | |||||| || ||||| Sbjct 657 TGAACTTTTAGTAAGTAAGATCTCTCGAGAGTTTTGAATCCAAA 614 >seq17286 Length=2746 Score = 185 bits (204), Expect = 1e-41 Identities = 708/1098 (64%), Gaps = 29/1098 (3%) Strand=Plus/Minus Query 53537 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 53596 |||||||| ||||| || || ||||| | ||| || || |||||| ||||||| Sbjct 1698 CCTTGAACTCCAATTCCAATGGGTCTGTTTCTGAAGTTTGAATATTCAGCCTCTGGAACT 1639 Query 53597 GGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCC 53656 || ||||| ||| |||| |||| | |||| | ||| | || || || || Sbjct 1638 GGGTAATAGTTATTATCAATAACTCTATTCAAGTTCTTAGTGATGGTCCTGGTTACTTCA 1579 Query 53657 TTCAGTTTGAGAAAATCAAATTGTCCATCT--ATT-ACAAACATGTTCAATGCAATAGAT 53713 | || | | | || || || ||| ||| |||||| | ||| | ||||||| Sbjct 1578 TGGAGCCTATCATAGTCGAACACACCTTCTTCATTGACAAACCTTGCCAAGGAAATAGAT 1519 Query 53714 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 53773 || ||||||||||| || |||| || ||| | |||| || || ||| ||| || Sbjct 1518 GCAAGATTACAAACAGCAACCTGATCCTTATCTGTGTATTCCATAATTTCACAGCAGAGG 1459 Query 53774 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 53833 || | |||||| ||||| | |||||| || ||| || | || | || ||| Sbjct 1458 TTTGAGCTCTTGATAGTTCCAAGATTTTGCTGGTTAGATTTCCTATTGGCAGAGTCTTTA 1399 Query 53834 TAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACA 53893 || || ||| |||| ||| || || ||||||||||| ||||| || ||||||| | Sbjct 1398 TAGAGCATGTATGGGACACCGGTCTCGATCTGGGATTCAATAATTGCGTTCCAGAGGTGT 1339 Query 53894 CGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTATAGTGTATACAATCGT 53950 |||||| ||| || ||| || || |||| ||| ||| | ||||||||| | Sbjct 1338 TGAGCCT---TTACAGTCTTGACTCCTTTACCTTCTTCTTCATATTGAGTATACAATTTT 1282 Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||| || ||||||||| | ||||||||| || |||| |||||| | | | | Sbjct 1281 TCAAATTCTTCTCCCCAACTTTCAAACAATCCAGGGCACTCATTCGGACAGAAGAGGGTC 1222 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 54069 || | || || || | |||| ||||| || || || | ||| | ||| || || Sbjct 1221 CAGTTGCCATCCTCTTCAACTCTCTTCATGAACAGGTCTCAGACCCACATAGCGTAGAAC 1162 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 || ||||| | ||| | ||| || || || |||||||| || | | |||| ||| Sbjct 1161 AAG-TCTCTTGCTCTGTTTTCATCTTTACCATGGTTCTTTTTGAGGTTCAAGAAC-TCAT 1104 Query 54130 A-ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTC 54188 | ||||| | |||||| ||||| | || |||| | | || | || |||| Sbjct 1103 AGATATCTGCATGCCATGGTTCGAGATAGATGGCGAAGGCGCCTTTTCTCTTACCGCCTC 1044 Query 54189 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 54248 | || || | ||||| || || | ||| | |||| | ||| || | | ||||| | Sbjct 1043 CTTGGTCAACATATCTTGCAGTATCATTGAAGACTCGAAGCATGGGCACCAATCCATTAG 984 Query 54249 ATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA----- 54303 | || ||||| || || || | | | || || | | | ||| Sbjct 983 AACGTCCGTTGGTTCCTCTAATGTA----AGAATTGGTCG-ATCTGATGCAGTGAACAGC 929 Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363 || || || || || || | |||||||| | || ||| | || || || |||||||| Sbjct 928 AAGTCCAATACCTCCGGCATTCTTAGAGATAATAGCACATTGCTTCAATGTGTCATAGAT 869 Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA---CATTTGGTGACG 54420 || |||||| ||||||| || || | || || ||| ||| |||||| | Sbjct 868 TCCATCTATAGAATCATCCCGCA--TTGCG-AGCAAGAAGCAAGAACTCATTTGTGGTTT 812 Query 54421 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 54480 |||||| | || || |||||||||| ||| || || |||||||| | | | | Sbjct 811 TGGAGTTCCTGAGTTGAACAAGGTAGGAGTAGCATGGGTGAACCATTTGTTACTCATCAA 752 Query 54481 ATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 54540 | || ||||| | || || || |||||| | || || || | | ||| | ||| Sbjct 751 GTCATAAGTCTCAAAGGCAGACTCAATATCCTTCTTGTGGATACCAATAGAGACTCTCAT 692 Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600 | ||| ||| |||||||| || ||||||| | ||||| || | ||| ||| |||| Sbjct 691 CAGCATTGTCTGTGGTCTTTCCACAATCTTGTCATCAATTTTTAGGAGGTAAGATCTTTC 632 Query 54601 CAAAGTTTTAAAACCAAA 54618 | |||||| || || || Sbjct 631 AAGAGTTTTGAATCCGAA 614 >seq11536 Length=1331 Score = 125 bits (138), Expect = 8e-24 Identities = 441/678 (65%), Gaps = 18/678 (3%) Strand=Plus/Plus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 ||| ||||| ||| ||||| |||| || | ||||| || ||||| || |||| Sbjct 118 CATGACTCCTGCTTTCTGGTACTCACTGACCTTCCTCTCGAAGAAGTTAGTCTTCCCTTG 177 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950 | || || | ||||| | ||| ||||||| | ||||| || | | || | Sbjct 178 GAGAGAGATCATATCCATCCACTCGAATGGATTACTTACATTGTATAGT-TTGGGGGCAC 236 Query 23951 CAATTCAGAAATCAA--TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAA 24008 ||| | ||| ||| ||| ||||| || ||||| || ||| |||| | || || Sbjct 237 CAAGTGTGAA-TCAGAGTCTGTCTGCTACGAACTCAATGTATTGGCTCATAAGTTTACTG 295 Query 24009 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 24068 ||||| || || |||| ||||| | | | ||| | ||||| ||||| || | || Sbjct 296 TTCATGCCGATGAGTTCGACTGGTAAGGACTCAGATACGAATTCGTGTTCGATCGCAACA 355 Query 24069 GCGTCTGTTATAAT-----AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTT 24123 || |||| || || ||||| | ||| || | || ||| || || | Sbjct 356 GCTTCTGACATGATCTCGTAGATCCTCTCGTTAG---ACACCTTGTTTACCATG--TGCT 410 Query 24124 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 24183 | | | ||| || |||||||| ||| || || || |||||| || |||||||| | Sbjct 411 TGTAAAGCAAGCAAGCGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAG 470 Query 24184 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA-TGAT 24242 | || ||||| ||||| | | |||||| |||||||| || | |||||| |||| Sbjct 471 AGAAGCAAAGTCCTGGCATCAAAGATCTCTTTTTGAGCCAAAAGATTG-CGCAAAATGAT 529 Query 24243 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG 24302 || || || || |||||||| || |||||||| || || ||||| | | | || Sbjct 530 CCGGAGAAAAAGATTCCTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTATCG 589 Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 24362 || | | ||||| || |||||| || ||||||||||| || | || | || Sbjct 590 CTCTTGTTGATCCATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCA 649 Query 24363 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 24422 ||||| || ||||| | | ||| || | || ||| ||| |||||||||| || Sbjct 650 ATAGCTTTGAAGAGGAAATCTTTCTCTTGTTCGTCACTAATATAGGTATCAATCAGGAGG 709 Query 24423 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 24482 || | || ||| ||||| || || |||| ||||||||||| ||||| | Sbjct 710 GAGTAGGTCTCACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACT 769 Query 24483 TC-GGTAATCTGTACTTC 24499 || |||| | || ||||| Sbjct 770 TCTGGTACT-TGGACTTC 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593301638447760