Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq49392 87.8 3e-12 seq10066 87.8 3e-12 seq2010 84.2 3e-11 >seq49392 Length=484 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || |||||||| ||||||||||| ||||| || || ||||| || || || || ||||| Sbjct 459 AAGATTCAAGACAAAGAAGGTATTCCACCAGACCAGCAAAGACTCATCTTCGCTGGAAAG 400 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | |||||| | |||| || || ||||| || ||||||||| || | ||| Sbjct 399 CAACTTGAGGATGGCAGAACCTTGTCCGACTATAACATCCAAAAAGAAAGTACCCTCCAT 340 Query 124743 TTGGTTTT 124750 ||||| || Sbjct 339 TTGGTCTT 332 >seq10066 Length=658 Score = 87.8 bits (96), Expect = 3e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| |||||||||| || |||||||||||||||| || ||||| | Sbjct 273 GATACTATTCTTAAGTTAAAACAGATGGTTGAAGATAAAGAAGGTATTCCTCCTGAAAAC 214 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||| |||| || || || | | |||||| ||| | | |||||||| Sbjct 213 CAAAGGCTTATCTTTGGTGGCAAGTAACTTAATGATAGTGAAACTATCCAGGATTATAAA 154 Query 124719 ATTCAAAAAGA 124729 ||| | ||||| Sbjct 153 ATTTATAAAGA 143 >seq2010 Length=934 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||| |||||||| |||||||| |||||||| || ||||| | |||||||||||||| Sbjct 225 AAAATCCAAGATAAGGAAGGTATCCCACCTGACCAGCAAAGATTAATTTTTGCAGGAAAG 284 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACT 124736 ||||| || ||| | |||| | ||||| || || || || || || ||| Sbjct 285 CAATTGGAAGATGGAAGAACCCTCTCCGATTACAACATCCAGAAGGAGTCCACT 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754921637641600