Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq49069 98.7 1e-15 seq741 86.0 7e-12 >seq49069 Length=388 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || || ||||| | ||||| | |||| || || ||||| |||||||| Sbjct 37 TCCTTCTGGATGTTATAATCTGAGAGAGTTCTTCCGTCCTCAAGTTGCTTTCCAGCGAAG 96 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 ||||||| |||||||| | || | | ||||| ||| ||| | || || |||| | Sbjct 97 ATGAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCC-TGAATCTTAGTCTTGACATT 155 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| || ||||||| || ||||| || || || || |||||||| Sbjct 156 GTCAATAGTGTCGCTTTGCTCGACATCGAGGGTAATGGTCTTACCAGTAAGGGTCTTTAC 215 Query 43172 AAAGATTTGCATTTTT 43187 ||||||||||| ||| Sbjct 216 GAAGATTTGCATATTT 231 >seq741 Length=354 Score = 86.0 bits (94), Expect = 7e-12 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || ||||||||||| || | || || | | || || || ||||| |||||||| Sbjct 3 TCTTTCTGAATATTGTAGTCTGACAATGTTCTTCCATCCTCAAGTTGCTTTCCAGCGAAG 62 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 || |||| |||||||| | || | | ||||| ||| ||| | || || |||| ||| Sbjct 63 ATAAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCC-TGAATCTTGGTCTTGA-CGT 120 Query 43112 CGCCACC-GTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | || ||||||||| || ||||| | || || || || || || || ||||| | Sbjct 121 TGTCAATAGTGTCGCTCTGCTCGACATCAAGAGTAATAGTCTTTCCAGTGAGGGTCTTCA 180 Query 43171 CAAAGATTTGCATTTTTA 43188 | ||||||||||| |||| Sbjct 181 CGAAGATTTGCATATTTA 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571413131968360