Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq11536 113 4e-20 >seq11536 Length=1331 Score = 113 bits (124), Expect = 4e-20 Identities = 425/654 (65%), Gaps = 17/654 (3%) Strand=Plus/Plus Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 ||| || || ||||| || | | || ||||||||||| || |||| || || || | Sbjct 130 TTTCTGGTACTCACTGACCTTCCTCTCGAAGAAGTTAGTCTTCCCTTGGAGAGAGATCAT 189 Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 14030 ||||| | || |||||||| || |||| | | ||| ||| ||| ||| Sbjct 190 ATCCATCCACTCGAATGGATTACTT-ACATTGTATAGTTTGGGGGCACCAAGTGTGAATC 248 Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 | ||| || || | ||||||||| ||||| ||| | | || ||||| || || | Sbjct 249 AGAGTCTGTCTGCTACGAACTCAATGTATTGGCTCATAAGTTTACTGTTCATGCCGATGA 308 Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150 ||| || || | | | || ||||| | ||| || | ||||| || || | Sbjct 309 GTTCGACTGGTAAGGACTCAGATACGAATTCGTGTTCGATCGCAACAGCTTCTGACATGA 368 Query 14151 TAATCGTA-ATAATTTCATTAGAAGGAGGATATTTTAGATGT--TTAAAAATTAAACACG 14207 | ||||| || | || ||||| | | ||| |||| || ||| || || | Sbjct 369 TC-TCGTAGATCCTCTCGTTAGAC--ACCTTGTTTACCATGTGCTTGTAAAGCAAGCAAG 425 Query 14208 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 14267 | |||||| ||||| || ||||||||| || | |||||| || || | ||||| Sbjct 426 CGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGTCCTG 485 Query 14268 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 14327 ||||||| || ||||| | |||||| ||||| ||||||||||| || || |||| Sbjct 486 GCATCAAAGATCTCTTTTTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAAAGATTC 545 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTC-TCCAAACGATGCTTTTTTGTTCGATATC 14386 | || || ||||| || || | | ||| | || | || | | ||||| ||| Sbjct 546 CTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTAT-CGCTCTTGTT---GATC 601 Query 14387 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14446 ||||| |||||||||||| || ||||| | ||| || |||||||||| || || Sbjct 602 CATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCAATAGCTTTGAAG 661 Query 14447 AAATGTTCCTTCTCTTTAGTACTTGA--AATGTATGTATCAATAAGTAAGCTATACATTT 14504 | || ||||||| || | | | ||| || |||||||| || | | || | | Sbjct 662 AGGAAATCTTTCTCTT--GTTCGTCACTAATATAGGTATCAATCAGGAGGGAGTAGGTCT 719 Query 14505 CAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14558 || || ||||| ||||| | || || || || || ||||| |||||| Sbjct 720 CACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACTTCTG 773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482004418869160