Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq11536 141 8e-29 seq49069 100 3e-16 >seq11536 Length=1331 Score = 141 bits (156), Expect = 8e-29 Identities = 549/853 (64%), Gaps = 20/853 (2%) Strand=Plus/Minus Query 57573 TGGAACATGTACAAAAAGGCAG-AAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTC 57631 ||| | |||||||| ||| ||| |||| | || ||| ||||| || | ||||| | Sbjct 972 TGGGAGATGTACAAGAAG-CAGCAAGCTTGCTTCTGGGTAGTCGAGGAGATCGACCTTGC 914 Query 57632 TAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACA 57688 || || | || ||| || | ||||| || ||| ||| | || ||||| | Sbjct 913 ATCAGACCTCAAAGACTGGAATGACAAGCTCAATGATGATGAAAGACACTTCATTAAGTA 854 Query 57689 CGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATT 57748 ||| | || || || || || || || ||||| || |||||| ||| | || | || Sbjct 853 CGTTCTTGCCTTCTTTGCTGCTTCAGACGGTATCGTCCTCGAGAACTTGATTGAGAACTT 794 Query 57749 TTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGA 57808 | ||||| ||||| | || | ||||||||| |||||||| ||| || || Sbjct 793 CGCTTCTGAAGTCCAAGTACCAGAAGTGAGATGCTTCTACGGATTCCAAAGTATGATGGA 734 Query 57809 AAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGA 57868 ||| | ||| || | || || || || || ||||| || | | ||| | | || Sbjct 733 GAACATCCATAGTGAGACCTACTCCCTCCTGATTGATACCTATATTAGTGACGAACAAGA 674 Query 57869 GAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTG 57928 |||| | || ||||| || || |||| || | || |||||||| || || Sbjct 673 GAAAGATTTCCTCTTCAAAGCTATTGAAAATATTGATACCGTCAAAAAGAAGGCTGAATG 614 Query 57929 GTCAATCAAATGGATAAA-AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCG 57987 | | || |||||||| || ||| || | || ||||| || ||||| ||||| || | Sbjct 613 GGCTATTAAATGGATCAACAAGAGCGATAGC----TTCGCTGAAAGGCTCATCGCCTTTG 558 Query 57988 CCGCCGTCGAAGGTATATTCTTTTCGGGCAGC--TTTGCGGCAATATTTTGGATGAAGAA 58045 || |||||||| || || || || || | | |||||| |||| |||||| | || || Sbjct 557 CCTGTGTCGAAGGAATCTTTTTCTCCGG-ATCATTTTGCG-CAATCTTTTGGCTCAAAAA 500 Query 58046 ACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCT 58105 | ||||||| || || || ||||| ||||| || | || || || || Sbjct 499 GAGATCTTTGATGCCAGGACTTTGCTTCTCTAACGAATTGATCTCTAGAGATGAAGGACT 440 Query 58106 CCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCG 58165 || |||||||| || ||| | | ||| ||||| || || || | | || | Sbjct 439 TCACACTGATTTCGCTTGCTTGCTTTACAAGCACATGGTAAACAAGGTGTCTAACGAGAG 380 Query 58166 CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCT 58225 |||| || || || | || || || ||||||||| | || || || | || || | Sbjct 379 GATCTACGAGATCATGTCAGAAGCTGTTGCGATCGAACACGAATTCGTATCTGAGTCCTT 320 Query 58226 ACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGC 58285 ||| || | | |||| ||||||| | | | ||| | ||||||||||| || || Sbjct 319 ACCAGTCGAACTCATCGGCATGAACAGTAAACTTATGAGCCAATACATTGAGTTCGTAGC 260 Query 58286 CGACAGACTTTTGCTCGAACTGATTGGAGAGC---GTCATTACAACACGAAAAATCCGTT 58342 |||||||| | || || |||| | | | ||||| | ||||| || Sbjct 259 AGACAGACTCTGATTCACAC---TTGGTGCCCCCAAACTATACAATGTAAGTAATCCATT 203 Query 58343 TGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAG 58402 || | ||| || ||||||| ||| | || ||||| ||||| ||||| | || || || Sbjct 202 CGAGTGGATGGATATGATCTCTCTCCAAGGGAAGACTAACTTCTTCGAGAGGAAGGTCAG 143 Query 58403 CGAATATCAAAAA 58415 || || || ||| Sbjct 142 TGAGTACCAGAAA 130 >seq49069 Length=388 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| |||||||| ||||||||||| || || || || || || ||| |||| || || | Sbjct 231 AAATATGCAAATCTTCGTAAAGACCCTTACTGGTAAGACCATTACCCTCGATGTCGAGCA 172 Query 31249 GTCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 ||||| | | || | ||||| || ||| | ||| |||||||| | || || | Sbjct 171 AAGCGACACTATTGACAATGTCAAGACTAAGATTCA-GGATAAGGAAGGTATCCCACCAG 113 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 ||||||| | || || |||||||| || || | || ||| | ||| | |||| Sbjct 112 ACCAGCAAAGACTCATCTTCGCTGGAAAGCAACTTGAGGACGGAAGAACTCTCTCAGATT 53 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||| || || ||||| || ||||| |||| || ||||| || || || Sbjct 52 ATAACATCCAGAAGGAATCTACCCTTCACTTGGTCCTCAGACTCAGAGGAGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445451092709040