Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq46144 87.8 4e-12 >seq46144 Length=480 Score = 87.8 bits (96), Expect = 4e-12 Identities = 194/284 (68%), Gaps = 13/284 (5%) Strand=Plus/Plus Query 35579 ATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGG----AGAATT 35634 |||||| | || ||||| ||||| | ||||| ||||||| | || ||| || Sbjct 37 ATGGCTTTACCGCCATGTCACATTCTCTCCCAATTCTATGTGGACACTGAGAACAGACTT 96 Query 35635 GTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 || || ||| |||||||| ||||| ||||| |||| | || || || ||||| ||||| Sbjct 97 -TCTTGTCAGATGTATCAGAGAAGCTGAGATATCGGCCTTGGAGTTCCGTTCAACATTGC 155 Query 35695 ATCATACTCTCTTCTGACT--CATCTGATGGC-CAG-TATGGTGGGTCTAAAACCGGGAG 35750 ||| | | ||||| ||| | |||| ||| |||| || | ||| |||| Sbjct 156 TAGCTACAGTTTGCTGACATGCATAT--TGGCTCAGCTATGCGGGCTTGAAAGA--GGAG 211 Query 35751 AGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCACATTGAGGTGTTAAAGA 35810 |||| |||| |||||||| || ||||| | || || | || || ||| |||||| Sbjct 212 AGTTCATCCATACTCTTGGAGATGCACATGTATACAAGAATCATATCGAGCCTCTAAAGA 271 Query 35811 AGCAGTTGTGCCGCGTCCCTAGACCATTCCCTAAGTTGAGGATT 35854 |||||||| | || | |||||||||| |||| | |||| Sbjct 272 AGCAGTTGAAGAGGTATCCAAAACCATTCCCTCAGTTAAAGATT 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988866530880585