Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq29984 183 3e-41 >seq29984 Length=2719 Score = 183 bits (202), Expect = 3e-41 Identities = 970/1520 (64%), Gaps = 52/1520 (3%) Strand=Plus/Minus Query 37143 AAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTC 37202 ||| ||||| | | |||||||| || || |||||| |||||| ||||||| | ||| Sbjct 2083 AAACTCTCCTGCAAGAACTCTTCTCGTGTAAATATTGGAAGTATAAGGTTCAAAGCTCTC 2024 Query 37203 ATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATT 37262 |||||| | || | |||||| ||| ||||| |||||||| || | | || || Sbjct 2023 ATTATTTCCTAGAACTTGAGAAGTACTGGCAGTTGGCATTGGAGCAACCAATAGAGAGTT 1964 Query 37263 TCTCAATCCATGTGTATTAATTCTCTTTTTT-AGTTCATTCCAATCCCATAAATCTGT-- 37319 ||| | ||||| || ||| |||| | | || ||| ||| || || ||| || Sbjct 1963 TCTAACACCATGCTCTTTGATT-TCTTCTCTCAGAGCATCCCAGTCATATCTATCAGTGT 1905 Query 37320 -TGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTAT 37378 ||| | |||| ||| | |||| | || | | |||| | ||| || | Sbjct 1904 ATGGTTCCTTTTCCCAGAGATCAAACTGCAACTTTCCTTGAGAGATTGGGGATCCTGGGA 1845 Query 37379 ATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCT-AGTGCGGCATAA 37437 |||||||||| |||| | || |||| ||||| | ||| | | || |||| Sbjct 1844 ATGTCTCATAGTGTCCTTCTTCCTTTGCTAAATCGCAGG-ACATTGTCAAGGCAGCATGG 1786 Query 37438 TATATTGTTTCGAAAATTTGTATATTTAATATTTTT-GCTTCTTCGCTATCGAATGCATA 37496 || || || ||||| || | | | ||| || | |||||||| || || |||| | Sbjct 1785 TAGATAGTCTCGAAGATCT-TCTTGTTAGCATCGGTAGCTTCTTCACTCTCAAATGGAAT 1727 Query 37497 GCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTT 37556 || | | | | ||||||| || || |||||||| || || || ||||| |||| Sbjct 1726 TTTCATTCTTTGATAAGCATCAGCTAATCCTTGAACACCAATTCCAATAGGTCT--GTTT 1669 Query 37557 CTTA--TTAGATCTAGAC-GATTCTATCACTGGATAATAATTGATATCTATTATTTTATT 37613 || | || || || | | ||| | ||| ||||| || | || || | | |||| Sbjct 1668 CTAAAGTTCGAA-TATTCAGCTTCAGGGATTGGGTAATAGTTATTGTCAATAACTCTATT 1610 Query 37614 TAGATTTTTA--ACTAGTATTTTCGTAA-----TTA---TTCTCAACTTGTCGAACATAA 37663 | ||| || | |||| || |||| | | || ||| | ||||| | Sbjct 1609 CAAATTCTTGGTAATAGTCCTT--GTAACAGAGTGAAGCTTTTCA--TAATCGAAGAC-- 1556 Query 37664 ATACGTTATTATTAACAAAT-TTACTCAACGAAATAGATCCTAGATTACATACAGCAACT 37722 | | | || ||| || || ||||| || ||||||||| | || || || ||||| ||| Sbjct 1555 -TCCTTCATCATTGACGAACCTTACTAAA-GAAATAGATGCCAGGTTGCAGACAGCTACT 1498 Query 37723 TCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTA---ATTGTT 37779 | ||||| | | || ||| |||| ||| || ||||| ||| || || ||| Sbjct 1497 TGATCTTTATCAGTATATTCCATAACCTCACAGCAAAGATT---CGAGCTTTTGATAGTT 1441 Query 37780 CCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTT 37839 || | ||| |||||| ||||| || || ||| || ||||| || || || || Sbjct 1440 CCAAGATTCTGTTGATTAGATTTCTTGTTGGCAGAGTCCTTATAGAGCATGTATGGAACC 1381 Query 37840 CCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTT-GCTTTAACGATCGC 37898 ||| || || || | || ||||||| ||||| | | | || || || ||| | Sbjct 1380 CCTGTCTCAATCTGGGATTCAATAATAGCATTCCAAAGA-TGCTGCGCCTT---GATTGT 1325 Query 37899 TTTAAttttttt-CTTTGTT--TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCA 37955 ||| || ||| | || || || |||| |||| | | | | || || | ||||| Sbjct 1324 TTTCTTTCCTTTGCCTTCTTGCTCATATTTAGTATAAAGTGTTTCGAATTCTTCACCCCA 1265 Query 37956 TACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTC 38015 || | ||||||||||||| | |||||| | || | ||| || |||||| || Sbjct 1264 GCATTCAAACAATCCTGGACATTGGTTTGGACAAAAGAGGGTCCAGTCACCATCTTCCTC 1205 Query 38016 TACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATA 38075 || | | ||| || |||||| ||||| | ||| || || ||| | | ||| | Sbjct 1204 AACTCTCTTCATGAACAAATCACAGACCCAAAGAGCATAGAACAAGTCTCTTGCTCTGTT 1145 Query 38076 TTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGG 38135 |||||| || || ||||| |||| || | ||| || | || || |||||||| || Sbjct 1144 TTCTTCTTTACCATGGTTCTTCTTTAAACTCAAAAACTCATAGATGTCTGCGTGCCAAGG 1085 Query 38136 TTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAAC 38195 ||| | ||| | | | |||||| ||| ||| ||||||| || | | ||||||| | Sbjct 1084 TTCGAGATAGACGGCAAAAGCTCCTTTTCTCTTACCACCTCCTTGGTCGACATATCTAGC 1025 Query 38196 TGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATAC--CG 38253 ||||| ||||| | || | ||| || |||| |||||||| | || || | | | Sbjct 1024 AGTGTTGTTATAGACCCTGAGCATTGGGACTACTCCATTAGAGATTCCATTAGTGCCTCT 965 Query 38254 GATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGT 38313 ||| || || | |||||| || | || | | ||| || |||||||| | Sbjct 964 GATGTAGGAGGA--TGTAGCTCTGATGCAATGGATAGCAAGTCCAATACCACCTGCGTTC 907 Query 38314 TTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTT 38373 || || || | || || ||||| | || ||| | || ||||| ||| || || | Sbjct 906 TTAGAGATAATGGCACACTGTTTGAGAGTGTCATAGATTCCTTCAATAGAATCCTCTTGC 847 Query 38374 ATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTA 38433 || | |||| ||| || | |||||| || |||||||| | ||||| | || Sbjct 846 ATCGCAAGTAAAAAGCACGAACTCATTTGTGGTTTGGGAGTTCCTGAATTAAACAGAGTG 787 Query 38434 GGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCT 38493 || |||||||| |||||||||| | || ||| || || || | || ||| Sbjct 786 GGGGATGCATGAGTGAACCATTTATTACTCATCAAATCGTAAGTCTCAAAAGCAGACTCT 727 Query 38494 ATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATT 38553 | ||| || || || | ||| || ||||| | ||| ||||||||| || || Sbjct 726 AGATCCTTCTTATGGATTCCGATAGACACTCTCATCAACATTGTTTGTGGTCTCTCAATG 667 Query 38554 ATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTA 38613 || || | || ||| |||| || ||| | || | ||||| | |||||| || | Sbjct 666 ATCTTGTCATGAACTTTTAGTAAGTAAGATCTCTCGAGAGTTTTGAATCCAAAGAAATCA 607 Query 38614 TATGAATAATCTCTATCGTA 38633 || | || |||||| | ||| Sbjct 606 TAAGTATGATCTCTCTTGTA 587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468193394839280