Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq11536 122 8e-23 >seq11536 Length=1331 Score = 122 bits (134), Expect = 8e-23 Identities = 496/769 (64%), Gaps = 17/769 (2%) Strand=Plus/Plus Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 ||| || || ||||| || | | || ||||||||||| || |||| || || || | Sbjct 130 TTTCTGGTACTCACTGACCTTCCTCTCGAAGAAGTTAGTCTTCCCTTGGAGAGAGATCAT 189 Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 13698 ||||| | || |||||||| || |||| | | ||| ||| ||| ||| Sbjct 190 ATCCATCCACTCGAATGGATTACTT-ACATTGTATAGTTTGGGGGCACCAAGTGTGAATC 248 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758 | ||| || || | |||||||| ||||| ||| | | || ||||| || || | Sbjct 249 AGAGTCTGTCTGCTACGAACTCAATGTATTGGCTCATAAGTTTACTGTTCATGCCGATGA 308 Query 13759 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818 ||| || || | | | || ||||| | ||| || | ||||| ||| || | Sbjct 309 GTTCGACTGGTAAGGACTCAGATACGAATTCGTGTTCGATCGCAACAGCTTCTGACATGA 368 Query 13819 TAATTGTA-ATAATCTCATTAGAAGGAGGATATTTTAGATGT--TTAAAAATTAAACACG 13875 | | ||| || |||| ||||| | | ||| |||| || ||| || || | Sbjct 369 TC-TCGTAGATCCTCTCGTTAGAC--ACCTTGTTTACCATGTGCTTGTAAAGCAAGCAAG 425 Query 13876 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13935 | |||||| ||||| || ||||||||| || | |||||| || || | ||||| Sbjct 426 CGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGTCCTG 485 Query 13936 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTC 13995 ||||||| || ||||| | |||||| ||||| |||||| ||||| || || |||| Sbjct 486 GCATCAAAGATCTCTTTTTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAAAGATTC 545 Query 13996 CCTCAACTGCAGCAAACGCTATTAATCGTTC-TCCAAACGATGCTTTTTTGTTCGATATC 14054 | || || ||||| || || | | ||| | || | || | | ||||| ||| Sbjct 546 CTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTAT-CGCTCTTGTT---GATC 601 Query 14055 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14114 ||||| |||||||||||| || ||||| | ||| || |||||||||| || || Sbjct 602 CATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCAATAGCTTTGAAG 661 Query 14115 AAATATTCCTTCTCTTTAGTACTTGA--AATGTATGTATCAATAAGTAAGCTATACATTT 14172 | | || ||||||| || | | | ||| || |||||||| || | | || | | Sbjct 662 AGGAAATCTTTCTCTT--GTTCGTCACTAATATAGGTATCAATCAGGAGGGAGTAGGTCT 719 Query 14173 CAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATT 14232 || || ||||| ||||| | || || || || |||||||| |||| | || Sbjct 720 CACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACTTCTGGTACTT 779 Query 14233 GTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAA 14292 | ||||| || || | || ||| || || || ||||| || ||| |||| Sbjct 780 GGACTTCAGAAGCGAAGTTCTCAATCAAGTTCTCGAGGACGATACCGTCTGAAGCAGCAA 839 Query 14293 AAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT 14341 | || || | | || ||||| |||| | || |||| ||||| || Sbjct 840 AGAAGGCAAGAACGTACTTAATGAAGTGTCTTTCATCATCATTGAGCTT 888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479388670395800