Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq11536 113 4e-20 >seq11536 Length=1331 Score = 113 bits (124), Expect = 4e-20 Identities = 494/769 (64%), Gaps = 17/769 (2%) Strand=Plus/Plus Query 13368 TTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATT 13427 ||| || || ||||| || | | || || |||||||| || |||| || || || | Sbjct 130 TTTCTGGTACTCACTGACCTTCCTCTCGAAGAAGTTAGTCTTCCCTTGGAGAGAGATCAT 189 Query 13428 TTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 13486 ||||| | ||||||||||| || |||| | | ||| ||| ||| ||| Sbjct 190 ATCCATCCACTCGAATGGATTACTT-ACATTGTATAGTTTGGGGGCACCAAGTGTGAATC 248 Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546 | | ||| || || | |||||||| ||||| ||| | | || ||||| || || | Sbjct 249 AGAGTCTGTCTGCTACGAACTCAATGTATTGGCTCATAAGTTTACTGTTCATGCCGATGA 308 Query 13547 GTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606 ||| || || | | || || ||||| | ||| || | ||||| || || | Sbjct 309 GTTCGACTGGTAAGGACTCAGATACGAATTCGTGTTCGATCGCAACAGCTTCTGACATGA 368 Query 13607 TAATCTTA-ATAATGTCATTAGAAGGAGGATATTTTAGATGT--TTAAAAATTAAACACG 13663 | || || || | || ||||| | | ||| |||| || ||| || || | Sbjct 369 TC-TCGTAGATCCTCTCGTTAGAC--ACCTTGTTTACCATGTGCTTGTAAAGCAAGCAAG 425 Query 13664 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13723 | |||||| ||||| || ||||||||| || | |||||| || || | ||||| Sbjct 426 CGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGTCCTG 485 Query 13724 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 13783 ||||||| || ||||| | |||||| ||||| ||||||||||| || || |||| Sbjct 486 GCATCAAAGATCTCTTTTTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAAAGATTC 545 Query 13784 CCTCAACTGCAGCAAACGCTATTAGTCGTTC-TCCAAACGATGCTTTTTTGTTTGATATC 13842 | || || ||||| || || || | ||| | || | || | | ||||| ||| Sbjct 546 CTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTAT-CGCTCTTGTT---GATC 601 Query 13843 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAAT 13902 ||||| |||||||||||| || ||||| | ||| || |||| || || ||||| Sbjct 602 CATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCAATAGCTTTGAAG 661 Query 13903 AAATGTTCCTTCTCTTTAGTACTTGA--AATGTATGTATCAATAAGTAAGCTATACATTT 13960 | || ||||||| || | | | ||| || |||||||| || | | || | | Sbjct 662 AGGAAATCTTTCTCTT--GTTCGTCACTAATATAGGTATCAATCAGGAGGGAGTAGGTCT 719 Query 13961 CAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATT 14020 || || ||||| || || | || || || || || ||||| |||||| || Sbjct 720 CACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACTTCTGGTACTT 779 Query 14021 GTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAA 14080 | || || || || | || |||||| || || ||||| || ||| |||| Sbjct 780 GGACTTCAGAAGCGAAGTTCTCAATCAAGTTCTCGAGGACGATACCGTCTGAAGCAGCAA 839 Query 14081 AAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT 14129 | || || | | || ||||| |||| | || |||| ||||| || Sbjct 840 AGAAGGCAAGAACGTACTTAATGAAGTGTCTTTCATCATCATTGAGCTT 888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478250276194680