Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq29984 275 8e-69 seq17286 210 3e-49 seq11536 113 6e-20 >seq29984 Length=2719 Score = 275 bits (304), Expect = 8e-69 Identities = 1076/1662 (65%), Gaps = 59/1662 (4%) Strand=Plus/Minus Query 70984 GTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTT 71043 ||||| || || |||||||||| ||| ||||| | ||||||||||||||||| | Sbjct 2250 GTCTTCTGAGGGATTTCCCAAACAGTCTTATAGAGATTCTTAATATCTTCTGGAACTCCT 2191 Query 71044 GTA-TTC--TGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCAT 71100 || ||| || | ||||||| | |||| | ||| || | || | ||||| Sbjct 2190 TTAATTCCTTGCAGGGATCCATTGCTTCCAATCAAAGCATTCTTTACTTCCCAAGTCCAT 2131 Query 71101 AATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGAC 71160 | | | | | ||| || | | | ||| |||| || ||| ||||| | Sbjct 2130 AGTCCAGCTTTGATCAAATCTTTTACTAAATGTTGATTTACGCAGATAAACTCTCCTGCA 2071 Query 71161 AATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAA 71220 | ||||| | ||||||||||| ||||| ||||| | |||||||||||| | | Sbjct 2070 AGAACTCTTCTCGTGTAAATATTGGAAGTATAAGGTTCAAAGCTCTCATTATTTCCTAGA 2011 Query 71221 ATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGT 71280 | ||||| ||| ||||| ||||| || || ||||||||| ||||||| |||||| Sbjct 2010 ACTTGAGAAGTACTGGCAGTTGGCATTGGAGCAACCAATAGAGAGTTTCTAACACCATGC 1951 Query 71281 GATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG---ATGGTACAACNNNN 71337 | ||||| ||| | |||| ||||| | | ||| | ||||| | | Sbjct 1950 TCTTTGATTTCTTCTCTCAGAGCATCCCAGTCATATCTATCAGTGTATGGTTC--CTTTT 1893 Query 71338 NNNNNNNNNNNNNNNNNNATGCCGTTACTAGCG-TAT----GATCCTGCATATGTATCGT 71392 | | || || | | || ||||||| |||| || | Sbjct 1892 CCCAGAGATCAAACTGCAA---CTTTCCTTGAGAGATTGGGGATCCTGGGAATGTCTCAT 1836 Query 71393 ATGGTCCTTCTTTTTCGGCTAGTTCACA--AC-TCGCCTCTAATGCTCCATAATAAATGG 71449 | ||||||||| | |||| || || || | | | || || ||| || || | Sbjct 1835 AGTGTCCTTCTTCCTTTGCTAAATCGCAGGACATTGTC---AAGGCAGCATGGTAGATAG 1779 Query 71450 TTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGA 71509 | ||||| |||||||| || ||| ||||| || ||||||||| | ||| | Sbjct 1778 TCTCGAAGATCTTCTTGTTAGCATCGGTAGCTTCTTCACTCTCAAATGGA-ATTTTCATT 1720 Query 71510 GAAT-AAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTA 71568 | | | || || |||||||||||||| ||||| || |||||||||| ||| || Sbjct 1719 CTTTGATAAGCATCAGCTAATCCTTGAACACCAATTCCAATAGGTCTGTTTCTAAAGTTC 1660 Query 71569 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 71628 ||| ||||||||| || || || ||||| ||| | || |||| | |||| | ||| || Sbjct 1659 GAATATTCAGCTTCAGGGATTGGGTAATAGTTATTGTCAATAACTCTATTCAAATTCTTG 1600 Query 71629 --ACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC-AAATCTCC--CATCTATTA 71683 | || | ||| | ||| | || || | |||| || |||| |||| | | Sbjct 1599 GTAATAGTCCTTGTA--ACAGAGTGAAGCTTTTCATAATCGAAGACTCCTTCATCATTGA 1542 Query 71684 CAAACACGTTC-AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA 71742 | ||| | | | || | || ||||||||| || || || ||||| | || ||| | | Sbjct 1541 CGAAC-CTTACTAAAGAAATAGATGCCAGGTTGCAGACAGCTACTTGATCTTTATCAGTA 1483 Query 71743 TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 71802 |||| |||| ||| ||||||||| | ||||| ||||| | ||| ||||||||| Sbjct 1482 TATTCCATAACCTCACAGCAAAGATTCGAGCTTTTGATAGTTCCAAGATTCTGTTGATTA 1423 Query 71803 CTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 71862 || ||||| | |||||||| || || | ||| || || |||||||| ||| Sbjct 1422 GATTTCTTGTTGGCAGAGTCCTTATAGAGCATGTATGGAACCCCTGTCTCAATCTGGGAT 1363 Query 71863 TCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTC--T 71919 || ||||| || ||||| | || | | ||||| ||| | ||||| || |||| | | Sbjct 1362 TCAATAATAGCATTCCA-AAGATGCTGCGCCTTGATTGTTTTCTT---TC-CTTTGCCTT 1308 Query 71920 CTT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT-GTCTAATCCA 71976 ||| || |||| ||||| | | |||||| || || |||| |||||| ||||| Sbjct 1307 CTTGCTCATATTTAGTATAAAGTGTTTCGAATTCTTCACCCC-AGCATTCAAACAATCCT 1249 Query 71977 GGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAG 72036 ||||||| || ||||| | | | ||| || ||||| || | |||| ||||| || Sbjct 1248 GGACATTGGTTTGGACAAAAGAGGGTCCAGTCACCATCTTCCTCAACTCTCTTCATGAAC 1189 Query 72037 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 72095 | |||| | ||||||||| ||| || | ||||| | ||| | || || || || Sbjct 1188 AAATCACAGACCCAAAGAGC-ATAGAACAAGTCTCTTGCTCTGTTTTCTTCTTTACCATG 1130 Query 72096 ATTCTT-TTTAAGATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATG 72153 ||||| ||||| || | || |||| || || | ||||| ||||| | || | | Sbjct 1129 GTTCTTCTTTAAACTCAA--AAACTCATAGATGTCTGCGTGCCAAGGTTCGAGATAGACG 1072 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | |||| | || ||||| || || | |||||||| ||||| ||||| Sbjct 1071 GCAAAAGCTCCTTTTCTCTTACCACCTCCTTGGTCGACATATCTAGCAGTGTTGTTATAG 1012 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || || | |||||| | | ||||| || ||||| || || ||| ||| Sbjct 1011 ACCCTGAGCATTGGGACTACTCCATTAGAGATTCCATTAGTGCCTCTGATGTAGGAGGAT 952 Query 72274 CTGGCACGAATATTGCTAATTGAT----AGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 | || | | ||| ||| ||| || || || || ||||| | |||||||| | Sbjct 951 GTAGCTC---TGATGC-AATGGATAGCAAGTCCAATACCACCTGCGTTCTTAGAGATAAT 896 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 || || |||| | || |||||||| || || ||| ||| || ||| ||||| Sbjct 895 GGCACACTGTTTGAGAGTGTCATAGATTCCTTCAATAGAATCCTCTTGCATCGCAAGTAA 836 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 ||| || | |||||| | |||||| | |||||| | || || || || || Sbjct 835 AAAGCACGAACTCATTTGTGGTTTGGGAGTTCCTGAATTAAACAGAGTGGGGGATGCATG 776 Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509 || |||||||| | | || | || ||| ||||||| ||| || |||| |||| | Sbjct 775 AGTGAACCATTTATTACTCATCAAATCGTAAGTCTCAAAAGCAGACTCTAGATCCTTCTT 716 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569 ||| ||||| | | || | ||| ||||| || ||||| |||| |||||||| || Sbjct 715 ATGGATTCCGATAGACACTCTCATCAACATTGTTTGTGGTCTCTCAATGATCTTGTCATG 656 Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611 | ||| | ||||| ||| | || | |||||| || ||||| Sbjct 655 AACTTTTAGTAAGTAAGATCTCTCGAGAGTTTTGAATCCAAA 614 >seq17286 Length=2746 Score = 210 bits (232), Expect = 3e-49 Identities = 769/1186 (65%), Gaps = 31/1186 (3%) Strand=Plus/Minus Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 || ||||| ||||| |||||||| |||| ||| || || || || ||||| | Sbjct 1785 TAGATGGTCTCGAATATCTTCTTGTTGACATCAGTAGCATCTTCACTTTCGAATGGG-AT 1727 Query 71503 TTTAAGAGAATAA-ACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561 ||| | | | | || || || | |||||||| ||||| || || ||||||| ||| Sbjct 1726 TTTCATCTTTTGATAAGCATCAGCGAGACCTTGAACTCCAATTCCAATGGGTCTGTTTCT 1667 Query 71562 CTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 71621 || ||| |||||| ||||||| || ||||| ||| |||| |||| | |||| | Sbjct 1666 GAAGTTTGAATATTCAGCCTCTGGAACTGGGTAATAGTTATTATCAATAACTCTATTCA- 1608 Query 71622 ATTTCTGACTATTACTT-TGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCT- 71679 | |||| | | | | || || || | || | | | || || || ||| Sbjct 1607 AGTTCTTAGTGATGGTCCTGGTTACTTCATGGAGCCTATCATAGTCGAACACACCTTCTT 1548 Query 71680 -ATT-ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 71737 ||| |||||| ||||| || |||||| ||||||||||| || |||| || || Sbjct 1547 CATTGACAAACCTTGCCAAGGAAATAGATGCAAGATTACAAACAGCAACCTGATCCTTAT 1488 Query 71738 CGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 71797 | | |||| ||||||||| ||| || || | |||||| ||||| | |||||| | Sbjct 1487 CTGTGTATTCCATAATTTCACAGCAGAGGTTTGAGCTCTTGATAGTTCCAAGATTTTGCT 1428 Query 71798 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCT 71857 | ||| || | || | || ||||| || || | || ||| || || |||| Sbjct 1427 GGTTAGATTTCCTATTGGCAGAGTCTTTATAGAGCATGTATGGGACACCGGTCTCGATCT 1368 Query 71858 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT-- 71915 | ||||| ||||| || ||||||| | | ||||||||| | ||||| || || Sbjct 1367 GGGATTCAATAATTGCGTTCCAGAGGTGTTGAGCCTTTAC---AGTCTTGACTCCTTTAC 1311 Query 71916 -TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATC 71974 |||| ||| ||||| ||||| ||| ||| || || ||||||||| | |||| Sbjct 1310 CTTCTTCTTCATATTGAGTATACAATTTTTCAAATTCTTCTCCCCAACTTTCAAACAATC 1251 Query 71975 CAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAA 72034 |||| || ||||||||||| | | | ||| | ||||| || | |||| ||||| | Sbjct 1250 CAGGGCACTCATTCGGACAGAAGAGGGTCCAGTTGCCATCCTCTTCAACTCTCTTCATGA 1191 Query 72035 AGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 | || || | ||| | ||| || || || ||||| | ||| | || || || || Sbjct 1190 ACAGGTCTCAGACCCACATAGCGTAGAACAAG-TCTCTTGCTCTGTTTTCATCTTTACCA 1132 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATAT 72152 |||||||| || | | |||| |||| ||||| | |||||| ||||| | || || Sbjct 1131 TGGTTCTTTTTGAGGTTCAAGAAC-TCATAGATATCTGCATGCCATGGTTCGAGATAGAT 1073 Query 72153 GGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 72212 ||| | | || | || ||||| || || | ||||| || || | ||| | Sbjct 1072 GGCGAAGGCGCCTTTTCTCTTACCGCCTCCTTGGTCAACATATCTTGCAGTATCATTGAA 1013 Query 72213 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 72272 |||| | ||| || | | ||||| || || ||||| || || || Sbjct 1012 GACTCGAAGCATGGGCACCAATCCATTAGAACGTCCGTTGGTTCCTCTAATGTA----AG 957 Query 72273 ACTGGCACGA----ATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 72328 | | | ||| || | || | || || || || || || | |||||||| | Sbjct 956 AATTGGTCGATCTGATGCAGTGAACAGCAAGTCCAATACCTCCGGCATTCTTAGAGATAA 897 Query 72329 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 72388 || ||| | || || || |||||||| || |||||| ||||||| || || | | Sbjct 896 TAGCACATTGCTTCAATGTGTCATAGATTCCATCTATAGAATCATCCCGCA--TTGCG-A 840 Query 72389 GAAAACAGCTAGA---CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445 | || ||| ||| |||||| | |||||| | || || |||||||||| || Sbjct 839 GCAAGAAGCAAGAACTCATTTGTGGTTTTGGAGTTCCTGAGTTGAACAAGGTAGGAGTAG 780 Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 72505 | || || |||||||| | | || | | || ||||||| || || || |||||| Sbjct 779 CATGGGTGAACCATTTGTTACTCATCAAGTCATAAGTCTCAAAGGCAGACTCAATATCCT 720 Query 72506 ATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT 72565 | || || || | | ||| | ||| | ||| ||| |||||||| || ||||||| Sbjct 719 TCTTGTGGATACCAATAGAGACTCTCATCAGCATTGTCTGTGGTCTTTCCACAATCTTGT 660 Query 72566 TATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611 || ||||| | | ||| ||| |||| | |||||| || || || Sbjct 659 CATCAATTTTTAGGAGGTAAGATCTTTCAAGAGTTTTGAATCCGAA 614 >seq11536 Length=1331 Score = 113 bits (124), Expect = 6e-20 Identities = 436/677 (64%), Gaps = 16/677 (2%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||||| ||| ||||| |||| || | ||||| || |||||||| |||| Sbjct 118 CATGACTCCTGCTTTCTGGTACTCACTGACCTTCCTCTCGAAGAAGTTAGTCTTCCCTTG 177 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 | || || | ||||| | || || ||||| | ||||| || | ||| || Sbjct 178 GAGAGAGATCATATCCATCCACTCGAATGGATTACTTACATTGTATAGTTTGGGGGCACC 237 Query 41881 CAATTCAGAAATCAA--TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAA 41938 || | ||| ||| ||| ||||| | ||| || || ||| |||| | || || Sbjct 238 -AAGTGTGAA-TCAGAGTCTGTCTGCTACGAACTCAATGTATTGGCTCATAAGTTTACTG 295 Query 41939 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 41998 ||||| || || |||| ||||| | | | ||| | ||||| ||||| || | || Sbjct 296 TTCATGCCGATGAGTTCGACTGGTAAGGACTCAGATACGAATTCGTGTTCGATCGCAACA 355 Query 41999 GCGTCTGTTATAAT-----AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTT 42053 || |||| || || ||||| | ||| || | || ||| || || | Sbjct 356 GCTTCTGACATGATCTCGTAGATCCTCTCGTTAG---ACACCTTGTTTACCATG--TGCT 410 Query 42054 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGG 42113 | | | ||| || |||||||| ||| || || ||||||||| || |||||||| | Sbjct 411 TGTAAAGCAAGCAAGCGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAG 470 Query 42114 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAA-TGAT 42172 | || ||||| ||||| | | |||||| |||||||| || | |||||| |||| Sbjct 471 AGAAGCAAAGTCCTGGCATCAAAGATCTCTTTTTGAGCCAAAAGATTG-CGCAAAATGAT 529 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232 || || || ||||||||||| || |||||||| || || || || | | | | Sbjct 530 CCGGAGAAAAAGATTCCTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTATCG 589 Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 || | | ||||| || |||||| || ||||||||||| || | || |||| Sbjct 590 CTCTTGTTGATCCATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCA 649 Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGA 42352 || || || ||||| | | ||| || | || ||| ||| ||||| |||| || Sbjct 650 ATAGCTTTGAAGAGGAAATCTTTCTCTTGTTCGTCACTAATATAGGTATCAATCAGGAGG 709 Query 42353 CTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCC 42412 || | || ||| ||||| || || | || ||||||||||| ||||| | Sbjct 710 GAGTAGGTCTCACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACT 769 Query 42413 TCGGTAACCTGTACTTC 42429 || | || || ||||| Sbjct 770 TCTGGTACTTGGACTTC 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670664478076120