Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq49069 129 4e-25 seq53863 98.7 7e-16 seq10326 82.4 6e-11 >seq49069 Length=388 Score = 129 bits (142), Expect = 4e-25 Identities = 181/253 (72%), Gaps = 1/253 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | ||| | || || |||||||| || || || || ||||| ||||| Sbjct 1 CCTCCTCTGAGTCTGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAG 60 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| |||| || | ||| || |||||| | || | | ||| ||||| ||| Sbjct 61 AGAGTTCTTCCGTCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGG 120 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || ||| || |||| ||| | || || || ||||| | || ||| Sbjct 121 ATACCTTCCTTATCCTGAATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACA 180 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT-GAAAATAA 15375 || | ||||||||| ||||| || || || ||||| || |||||||||||| ||| || Sbjct 181 TCGAGGGTAATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCATATTTCTTAAAAAA 240 Query 15376 AATTTTAATACTT 15388 |||||| || || Sbjct 241 TATTTTATTAATT 253 >seq53863 Length=275 Score = 98.7 bits (108), Expect = 7e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| | || || || ||||| || || ||||| |||||||| || Sbjct 109 CCACCTCTCAATCTGAGGACCAAGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAG 168 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| ||||||| ||||| || |||||| | ||||| | ||| || || ||| Sbjct 169 AGAGTTCTTCCGTCTTCCAATTGCTTTCCAGCGAAGATCAATCTTTGCTGATCTGGAGGA 228 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATC 15303 || ||||| || || || ||| ||||||| | || || ||||| Sbjct 229 ATACCTTCCTTATCTTGGATCTTGGTCTTTACGTTGTCAATAGTATC 275 >seq10326 Length=2715 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207 ||| | ||| || |||| || || || || || |||||||| || || |||| | Sbjct 2328 TCTGAGAACCAAGTGAATTGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCC 2387 Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267 |||||| | ||| || ||||| | || | | ||| ||||| ||||||||||||| | Sbjct 2388 GTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTTTGCTGGTCAGCTGGAATTCCTTCTCT 2447 Query 15268 GTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 || || ||| |||| | | || || ||||| | || ||||| | ||| || Sbjct 2448 CTCCTGCATCTTGGTCTTGATTGTGTCAATTGTATCAGATTGCTCGACATCGAGGGTCAT 2507 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATAT 15365 || |||| |||| || || ||||| |||||||||| Sbjct 2508 TGTCCTACCAGTCAAGGTCTTAACAAAGATTTGCATAT 2545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361929421643367