Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq11536 109 5e-19 >seq11536 Length=1331 Score = 109 bits (120), Expect = 5e-19 Identities = 300/457 (66%), Gaps = 7/457 (2%) Strand=Plus/Plus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || || |||||| ||| | ||||||||||||| || | ||||| || || || Sbjct 422 CAAGCGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGT 481 Query 13211 CCCGGCAT--AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaa 13268 || ||||| ||| ||| ||||| | |||||| || || ||| || || || |||| Sbjct 482 CCTGGCATCAAAGATCTC--TTTTTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAA 539 Query 13269 aTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCT 13328 | |||||||| || ||||| || || | ||||||| | | |||| | | | Sbjct 540 AGATTCCTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAA---GCTATCGCTCTTGT 596 Query 13329 CTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGT 13388 ||||| || | ||||| | || || | ||| ||| | |||||||| || || | Sbjct 597 TGATCCATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCAATAGCTT 656 Query 13389 TAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACA 13448 | || | ||| ||| || | ||| |||||| ||||| |||| | | || Sbjct 657 TGAAGAGGAAATCTTTCTCTTGTTCGTCACTAATATAGGTATCAATCAGGAGGGAGTAGG 716 Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508 | || ||| || || |||||| ||||||| || || || ||||| | |||| || Sbjct 717 TCTCACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACTTCTGGTA 776 Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 | || ||||| || || | || ||||| ||| || || ||||| ||||| Sbjct 777 CTTGGACTTCAGAAGCGAAGTTCTCAATCAAGTTCTCGAGGACGATACCGTCTGAAGCAG 836 Query 13569 CaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC 13605 |||| || ||||| | || |||||| || | | |||| Sbjct 837 CAAAGAAGGCAAGAACGTACTTAATGAAGTGTCTTTC 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430685171236974