Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq49069 125 6e-24 seq49392 105 6e-18 seq53863 95.1 1e-14 >seq49069 Length=388 Score = 125 bits (138), Expect = 6e-24 Identities = 175/245 (71%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| | || | |||||||| | ||||||||||| || | ||||||||| Sbjct 1 CCTCCTCTGAGTCTGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAG 60 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||||| || || ||||| | ||||| | ||||||||| ||||| || Sbjct 61 AGAGTTCTTCCGTCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGG 120 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| || || | ||| || | |||||| | | | |||||| || ||||| Sbjct 121 ATACCTTCCTTATCCTGAATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACA 180 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA---TGCTTACAACA 95017 || | || ||||| || |||||||| || || || ||||| |||| | |||| || | Sbjct 181 TCGAGGGTAATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCATATTTCTTAAAAAA 240 Query 95018 TATTT 95022 ||||| Sbjct 241 TATTT 245 >seq49392 Length=484 Score = 105 bits (116), Expect = 6e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 |||| | ||| ||||| | || ||| ||||| || | ||| ||| ||||| | ||||| Sbjct 309 TTTAGAATCCACCTCTGAGTCTCAAGACCAAATGGAGGGTACTTTCTTTTTGGATGTTAT 368 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | ||| || || || |||||| || || ||||| | ||||| | ||||||||| | Sbjct 369 AGTCGGACAAGGTTCTGCCATCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGT 428 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 |||| ||||||||||||||||| | ||| || | ||| ||| Sbjct 429 CTGGTGGAATACCTTCTTTGTCTTGAATCTTAGTCTTTACG 469 >seq53863 Length=275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| | ||| |||||||||| | |||||||| | || ||||||||||| | ||| || Sbjct 102 TTAGAATCCACCTCTCAATCTGAGGACCAAGTGGAGGGTTGATTCCTTTTGGATGTTGTA 161 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 || | ||| | || |||| || ||||| | ||||| |||||||||||||| Sbjct 162 GTCAGAGAGAGTTCTTCCGTCTTCCAATTGCTTTCCAGCGAAGATCAATCTTTGCTGATC 221 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 ||||||||||||||| || || | || || | ||| ||| Sbjct 222 TGGAGGAATACCTTCCTTATCTTGGATCTTGGTCTTTACG 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447974106823320