Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq29984 179 1e-39 seq17286 178 3e-39 seq11536 118 3e-21 >seq29984 Length=2719 Score = 179 bits (198), Expect = 1e-39 Identities = 455/682 (67%), Gaps = 10/682 (1%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || || | || || ||| ||| | ||||||| || ||||| ||| ||| Sbjct 770 TTCACTCATGCATCCCCCACTCTGTTTAATTCAGGAACTCCCAAACCACAAATGAGTTCG 829 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 |||||| | || ||| | || ||||| || || || |||| |||||| || || | Sbjct 830 TGCTTTTTACTTGCGATGCAAGAGGATTCTATTGAAGGAATCTATGACACTCTCAAACAG 889 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 ||||| |||| || ||||| ||||| || ||||| | | ||||| | | || Sbjct 890 TGTGCCATTATCTCTAAGAACGCAGGTGGTATTGGACTTGCTATCCATTGCATCAGAGCT 949 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 ||| | ||||| | ||||| ||| ||| ||||| | || || ||||| | Sbjct 950 ACATC-CTCCTACATCAGAGGCACTAATGGAATCTCTAATGGAGTAGTCCCAATGCTCAG 1008 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 || | | |||| ||||| || || |||||||| || || || ||| | ||||| || || Sbjct 1009 GGTCTATAACAACACTGCTAGATATGTCGACCAAGGAGGTGGTAAGAGAAAAGGAGCTTT 1068 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG-GAAAA 363904 ||| | |||||||| ||| || || || || | ||||||| ||||| | ||| | Sbjct 1069 TGCCGTCTATCTCGAACCTTGGCACGCAGACATCTATGAGTTT-TTGAGTTTAAAGAAGA 1127 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || ||||| ||| | ||| | || |||||||||| |||||||| | ||| Sbjct 1128 ACCATGGTAAAGAAGAAAACAGAGCAAGAGACTTGTTCTATGCTCTTTGGGTCTGTGATT 1187 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||| | || |||| || | | ||| | |||||||| ||| || |||||| Sbjct 1188 TGTTCATGAAGAGAGTTGAGGAAGATGGTGACTGGACCCTCTTTTGTCCAAACCAATGTC 1247 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCT--ATACGAAAAGTATGAATC 364082 |||| | | || |||||||| || | | | || |||| ||| ||||| Sbjct 1248 CAGGATTGTTTGAATGCTGGGGTGAAGAATTCGAAACACTTTATACTAAA--TATGAGCA 1305 Query 364083 GGAGGG-AAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 || || ||||| | || ||||| || ||| | || ||| ||| || || || | Sbjct 1306 AGAAGGCAAAGGAAAGAAA-ACAATCAAGGCGCAGCATCTTTGGAATGCTATTATTGAAT 1364 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | |||||||||||||| || || ||| | || || || || |||| || || | Sbjct 1365 CCCAGATTGAGACAGGGGTTCCATACATGCTCTATAAGGACTCTGCCAACAAGAAATCTA 1424 Query 364202 ACCAGCAGCACCTTGGTACAAT 364223 | || ||| | ||||| || || Sbjct 1425 ATCAACAGAATCTTGGAACTAT 1446 >seq17286 Length=2746 Score = 178 bits (196), Expect = 3e-39 Identities = 844/1313 (64%), Gaps = 55/1313 (4%) Strand=Plus/Plus Query 363382 TATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGG-TGA 363440 |||||| | ||||||| || || | || | ||| ||||| | || ||| | ||| Sbjct 605 TATGATTTCTTCGGATTCAAAACTCTTGAAAGATCTTACCT----CCTAAAAATTGATGA 660 Query 363441 TA---TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCC 363497 | |||| ||| | || ||| ||| | ||| | || ||||||||||||| Sbjct 661 CAAGATTGTGGAAAGACCACAGACAATGCTGATGAGAGTCTCTATTGGTATCCACAAGAA 720 Query 363498 GGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTATTCACGCACG 363556 |||| |||| | || |||| || ||| | | | ||| | || ||||| || | Sbjct 721 GGATATTGAGTCTGCCTTTGAGACTTATGACTTGATGAGTAACAAATG-GTTCACCCATG 779 Query 363557 CCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC 363616 | || || || ||| ||| | ||||||| || ||||| ||| ||||||||| | | Sbjct 780 CTACTCCTACCTTGTTCAACTCAGGAACTCCAAAACCACAAATGAGTTCTTGCTTCTTGC 839 Query 363617 TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTA 363676 | |||| ||| ||||| || || || |||| ||||||| | ||| | |||||| ||| Sbjct 840 TCGCAATGCGGGATGATTCTATAGATGGAATCTATGACACATTGAAGCAATGTGCTATTA 899 Query 363677 TTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCAC--AAT--GTTCGTGCACAGAAC 363732 | || |||||||| || || ||||| | | | ||| || | ||| || || Sbjct 900 TCTCTAAGAATGCCGGAGGTATTGGACTTGCTGTTCACTGCATCAGATCG---AC-CAAT 955 Query 363733 AGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTT 363792 ||||||| | || || ||| || ||||| |||| ||||||||||| || || Sbjct 956 TCTTACATTAGAGGAACCAACGGACGTTCTAATGGATTGGTGCCCATGCTTCGAGTCTTC 1015 Query 363793 GACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATG 363852 | ||||||| || || || ||||| || || || ||| | ||||| || || || || Sbjct 1016 AATGATACTGCAAGATATGTTGACCAAGGAGGCGGTAAGAGAAAAGGCGCCTTCGCCATC 1075 Query 363853 TATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTG-AGCTCCGGAAAAACACGGG 363911 |||||||| || ||||| ||||| | |||| |||||| | ||| || ||| || Sbjct 1076 TATCTCGAACCATGGCATGCAGATATCTATGAG-TTCTTGAACCTCAAAAAGAACCATGG 1134 Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971 ||||| ||| | ||| | || ||||||| || | ||||| | |||| || || Sbjct 1135 TAAAGATGAAAACAGAGCAAGAGACTTGTTCTACGCTATGTGGGTCTGAGACCTGTTCAT 1194 Query 363972 GAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCT 364031 |||| | || || | | | || ||| | ||||| || || | || || || || | Sbjct 1195 GAAGAGAGTTGAAGAGGATGGCAACTGGACCCTCTTCTGTCCGAATGAGTGCCCTGGATT 1254 Query 364032 TTCCGATGTATGGGGTGACGACTATG-----TTGCTCTATACGAAAAGTATGAA-TCGGA 364085 | || ||||| || || | || ||| ||||| || |||||| | | Sbjct 1255 GTTTGAAAGTTGGGGAGAAGAATTTGAAAAATTG---TATACTCAA--TATGAAGAAGAA 1309 Query 364086 GGGAAAGG-CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 || ||||| || ||||| | || || | || ||| || || || || || | Sbjct 1310 GGTAAAGGAGTC--AAGACTGTAAAGGCTCAACACCTCTGGAACGCAATTATTGAATCCC 1367 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 |||| ||||| || || || ||| | || ||||| || ||| | || || |||| Sbjct 1368 AGATCGAGACCGGTGTCCCATACATGCTCTATAAAGACTCTGCCAATAGGAAATCTAACC 1427 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACA 364261 |||| | ||||| || | ||| ||||| ||||| || || ||||| ||||||| Sbjct 1428 AGCAAAATCTTGGAACTA-TCA--AGAGCTCAAACCTCTGCTGTGAAATTATGGAATACA 1484 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC---GTTTG 364318 | | | || || ||| || ||||| ||||| || || | ||| ||| ||||| Sbjct 1485 CAGATAAGGATCAGGTTGCTGTTTGTAATCTTGCATCTATTTC-CTT--GGCAAGGTTTG 1541 Query 364319 TAA---AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACC--TATCATGCTAC 364373 | | |||| ||| || ||| | | || |||| |||||| | ||| || Sbjct 1542 TCAATGAAGAAGGTGTGTTCGACTATGATAGGCTCCATGAAGTAACCAGGACCAT--CAC 1599 Query 364374 TTGCAATCTCGACAAG-GTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTT 364432 | || || || || ||||| || || || ||||| ||| |||| || || || || Sbjct 1600 TAAGAA-CTTGAATAGAGTTATTGATAATAACTATTACCCAGTTCCAGAGGCTGAATATT 1658 Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGA 364492 | || | | | | || ||||| |||| || || || |||||||| | || | | Sbjct 1659 CAAACTTCAGAAACAGACCCATTGGAATTGGAGTTCAAGGTCTCGCTGATGCTTATCAAA 1718 Query 364493 TGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAA 364552 | | || || |||| || || ||| || | | || ||| |||| || || | Sbjct 1719 AGATGAAAATCCCATTCGAAAGTGAAGATGCTACTGATGTCAACAAGAAGATATTCGAGA 1778 Query 364553 CAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612 | || || ||| || |||||| || | || || || || | ||| | || Sbjct 1779 CCATCTACCATGCTGCCATGACTATGTCCTTGGACTTAGCTAAGGAAGAAGGACATTATG 1838 Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG 364665 || | || || || |||| |||||||||||||| |||||||| ||| Sbjct 1839 AAACATTCCCAGGATCTCCAATTTCCCAGGGAAAATTCCAATTTGATCTTTGG 1891 >seq11536 Length=1331 Score = 118 bits (130), Expect = 3e-21 Identities = 493/765 (64%), Gaps = 25/765 (3%) Strand=Plus/Minus Query 22197 ACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAA 22256 ||| || || || || |||| || ||||||||| | |||||||||| || | ||||| Sbjct 868 ACACTTCATTAAGTACGTTCTTGCCTTCTTTGCTGCTTCAGACGGTATCGTCCTCGAGAA 809 Query 22257 TCT-AGTGACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTG 22315 | | ||| || || || |||||| | ||| ||||| | ||||| ||||| || Sbjct 808 CTTGATTGAG-AACTTCGCTTCTGAAGTCCAAGTACCAGAAGTGAGATGCTTCTACGGAT 750 Query 22316 TGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCG 22375 | |||| ||||| || || | || || || || || | || | | | | Sbjct 749 TCCAAAGTATGATGGAGAACATCCATAGTGAGACCTACTCCCTCCTGAT----TGATACC 694 Query 22376 TAGAAGATAAAGACGAACAAC-GAAA-----CTTATTCCGCGCGATTCGCACCATTCAAT 22429 || | || ||||||||| |||| | | ||| || ||| | ||| | Sbjct 693 TATAT--TAGTGACGAACAAGAGAAAGATTTCCTCTTCAAAGCTATTGAAAATATTGATA 636 Query 22430 CAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCA-TTCGCG 22488 | | || || ||||| || ||||| | |||||||| ||||| || || | ||||| Sbjct 635 CCGTCAAAAAGAAGGCTGAATGGGCTATTAAATGGATCAACAA-GAGCGATAGCTTCGCT 577 Query 22489 GAACGTCTTATTGCATTTGC-TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGC 22547 ||| | || || || ||||| |||| | ||||| || || || || ||| ||||||| || Sbjct 576 GAAAGGCTCATCGCCTTTGCCTGTG-TCGAAGGAATCTTTTTCTCCGGATCATTTTGCGC 518 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 |||||||||||| ||||| | | | ||||| || || || || || || || || Sbjct 517 AATCTTTTGGCTCAAAAAGAGATCTTTGATGCCAGGACTTTGCTTCTCTAACGAATTGAT 458 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCAT 22667 ||||||| || ||||| || ||||| || || |||| || || || || | Sbjct 457 CTCTAGAGATGAAGGACTTCACACTGATTTCGCTTGCTTGCTTTA---CAAGCACATGGT 401 Query 22668 TCATAAACTTCCATATGAAA--CTGTACTTGATATTATTACAAATGCAGTTGAACTTGAA 22725 | || | | | || | | ||| || || || || | || |||| | ||| Sbjct 400 AAACAAGGTGTCTAACGAGAGGATCTAC--GAGATCATGTCAGAAGCTGTTGCGATCGAA 343 Query 22726 CGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATG 22785 | ||| | | ||| | |||||||| ||||| || || || || ||| Sbjct 342 CACGAATTCGTATCTGAGTCCTTACCAGTCGAACTCATCGGCATGAACAGTAAACTTATG 283 Query 22786 AGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCAT 22845 || ||| ||| | || || ||||| | || | | | |||| ||| | || | Sbjct 282 AGCCAATACATTGAGTTCGTAGCAGACAGACTCTGATTCACACTTGGTGCCCCCAAACTA 223 Query 22846 TATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAAT 22905 || || || ||||||||| || |||||||| | || || || |||| ||||| || Sbjct 222 TACAATGTAAGTAATCCATTCGAGTGGATGGATATGATCTCTCTCCAAGGGAAGACTAAC 163 Query 22906 TTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950 |||||||| | | || |||| ||||| |||||||| || ||| Sbjct 162 TTCTTCGAGAGGAAGGTCAGTGAGTACCAGAAAGCAGGAGTCATG 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302408641351034