Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq49069 109 5e-19 seq49392 98.7 9e-16 >seq49069 Length=388 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | || ||||| || | ||||| || | |||||| |||| |||||| Sbjct 230 AATATGCAAATCTTCGTAAAGACCCTTACTGGTAAGACCATTACCCTCGATGTCGAGCAA 171 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | |||||| || || | ||||| |||||| || || ||||| || || || || Sbjct 170 AGCGACACTATTGACAATGTCAAGACTAAGATTCAGGATAAGGAAGGTATCCCACCAGAC 111 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || || ||||| || | || || |||||||| || || | |||| || |||||| Sbjct 110 CAGCAAAGACTCATCTTCGCTGGAAAGCAACTTGAGGACGGAAGAACTCTCTCAGATTAT 51 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || |||||||| |||| || || | ||| | |||||||| Sbjct 50 AACATCCAGAAGGAATCTACCCTTCACTTGGTCCTCAGACTCAGAGGAGG 1 >seq49392 Length=484 Score = 98.7 bits (108), Expect = 9e-16 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || |||||| ||||||||||| || || || || || Sbjct 483 GACACCATTGACAACGTAAAGACTAAGATTCAAGACAAAGAAGGTATTCCACCAGACCAG 424 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| || | || || |||||||| || |||| ||||| | | ||| |||||| Sbjct 423 CAAAGACTCATCTTCGCTGGAAAGCAACTTGAGGATGGCAGAACCTTGTCCGACTATAAC 364 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 || ||||||||| ||| | ||||| || || ||| | ||||| ||| | ||| Sbjct 363 ATCCAAAAAGAAAGTACCCTCCATTTGGTCTTGAGACTCAGAGGTGGATTCTAA 310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429639492890985