Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq49069 87.8 2e-12 seq741 82.4 6e-11 >seq49069 Length=388 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||| |||||||| || || || || || || || || ||||||||| |||| ||| Sbjct 231 AAATATGCAAATCTTCGTAAAGACCCTTACTGGTAAGACCATTACCCTCGATGTCGAGCA 172 Query 115342 CAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 ||||||||| ||| |||| || || || ||| ||||| ||||| |||| | Sbjct 171 AAGCGACACTATTG-ACAATGTCAAGACTAAGATTCAGGATAAGGAAGGTATCCCACCAG 113 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 | ||||||||||| || | || || || ||| | || || | | ||| | | |||| Sbjct 112 ACCAGCAAAGACTCATCTTCGCTGGAAAGCAACTTGAGGACGGAAGAACTCTCTCAGATT 53 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||| || || || ||||| | || |||| | ||| | ||||||| Sbjct 52 ATAACATCCAGAAGGAATCTACCCTTCACTTGGTCCTCAGACTCAGAGGAGG 1 >seq741 Length=354 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 |||| |||||||| || || || || ||||| ||||| || ||||| | || ||| Sbjct 198 TAAATATGCAAATCTTCGTGAAGACCCTCACTGGAAAGACTATTACTCTTGATGTCGAGC 139 Query 115341 CCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 ||||||||| ||| |||| || || || ||| ||||| ||||| |||| Sbjct 138 AGAGCGACACTATTG-ACAACGTCAAGACCAAGATTCAGGATAAGGAAGGTATCCCACCA 80 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 || |||||||||||||| | || || || ||| | || |||| | ||| || | || Sbjct 79 GACCAGCAAAGACTTATCTTCGCTGGAAAGCAACTTGAGGATGGAAGAACATTGTCAGAC 20 Query 115460 TATAACATTCAAAAAGA 115476 || || ||||| ||||| Sbjct 19 TACAATATTCAGAAAGA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425050659782440