Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq29984 269 3e-67 seq17286 179 5e-40 seq11536 125 9e-24 >seq29984 Length=2719 Score = 269 bits (298), Expect = 3e-67 Identities = 1097/1705 (64%), Gaps = 43/1705 (3%) Strand=Plus/Minus Query 61982 GATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGT 62041 |||||| |||| ||||| | | | ||||| ||| | || | || ||||| || Sbjct 2301 GATTGAGATTGACAAATGAATGGTGCTCTGTCGATAGCTAAGTTGAGAAGAGTCTTCTGA 2242 Query 62042 GGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA-TTC-- 62098 || |||||||||| ||| ||||| | ||||||||||||||||| | || ||| Sbjct 2241 GGGATTTCCCAAACAGTCTTATAGAGATTCTTAATATCTTCTGGAACTCCTTTAATTCCT 2182 Query 62099 TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTC 62158 || | ||||||| | | || | |||||| | || | |||||| | Sbjct 2181 TGCAGGGATCCATTGCTTCCAATCAAAGCATTCTTTACTTCCCAAGTCCATAGTCCAGCT 2122 Query 62159 TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTC 62218 | | | ||| || | | | ||| |||| || ||| ||||| | | ||||| Sbjct 2121 TTGATCAAATCTTTTACTAAATGTTGATTTACGCAGATAAACTCTCCTGCAAGAACTCTT 2062 Query 62219 CGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCA 62278 | ||||||||||| ||||| ||||| | |||||||||||| | || ||||| | Sbjct 2061 CTCGTGTAAATATTGGAAGTATAAGGTTCAAAGCTCTCATTATTTCCTAGAACTTGAGAA 2002 Query 62279 GTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCT--GA 62336 || ||||| ||||| || || ||||||| | ||||||| ||| ||| ||| || Sbjct 2001 GTACTGGCAGTTGGCATTGGAGCAACCAATAGAGAGTTTCTAACACC--ATGCTCTTTGA 1944 Query 62337 TTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG---ACGGTACAACNNNNNNNNNNN 62393 ||| ||| | |||| ||||| | | ||| | | ||| | Sbjct 1943 TTTCTTCTCTCAGAGCATCCCAGTCATATCTATCAGTGTATGGTTCCTTTTCCCAGAGAT 1884 Query 62394 NNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCT 62453 || | | || | | | |||||| |||| || || ||||||| | Sbjct 1883 CAAACTGCAACTTTCCTTGAGAGATTGGGGATCCTGGGAATGTCTCATAGTGTCCTTCTT 1824 Query 62454 TCTCAGCTAGTTCACA--AC-TCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCT 62510 || |||| || || || | | | || ||| | | || || || |||||||||| Sbjct 1823 CCTTTGCTAAATCGCAGGACATTGTC---AAGGCAGCATGGTAGATAGTCTCGAAGATCT 1767 Query 62511 TCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA-ACGCG 62569 |||| || ||| ||||| || ||||||||| | ||| | | | | || Sbjct 1766 TCTTGTTAGCATCGGTAGCTTCTTCACTCTCAAATGGA-ATTTTCATTCTTTGATAAGCA 1708 Query 62570 TCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCT 62629 || |||||||||||||||||||| || |||||||| | ||| || || ||||||| Sbjct 1707 TCAGCTAATCCTTGAACACCAATTCCAATAGGTCTGTTTCTAAAGTTCGAATATTCAGCT 1648 Query 62630 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAT--TACTT 62687 || || || || ||||| ||| | || |||| | |||| | ||| || ||| | ||| Sbjct 1647 TCAGGGATTGGGTAATAGTTATTGTCAATAACTCTATTCAAATTCTTGGTAATAGTCCTT 1588 Query 62688 TGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAACATGTTCA 62744 | ||| | || || | |||| || || |||| | || ||| | | Sbjct 1587 GTA--ACAGAGTGAAGCTTTTCATAATCGAAGACTCCTTCATCATTGACGAACCTTACTA 1530 Query 62745 ATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCT 62804 | | || ||||||||| || || || ||||| | || ||| | ||||| || | || Sbjct 1529 AAGAAATAGATGCCAGGTTGCAGACAGCTACTTGATCTTTATCAGTATATTCCATAACCT 1470 Query 62805 CAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTAC 62864 || ||||||||| | ||||| ||||| | ||| ||||||||| || ||||| Sbjct 1469 CACAGCAAAGATTCGAGCTTTTGATAGTTCCAAGATTCTGTTGATTAGATTTCTTGTTGG 1410 Query 62865 ACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTT 62924 | |||||||| || ||| ||||| || || |||||||| ||||| ||||| || | Sbjct 1409 CAGAGTCCTTATAGAGCATGTATGGAACCCCTGTCTCAATCTGGGATTCAATAATAGCAT 1350 Query 62925 TCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTC--TCTT--TCGTATAG 62979 |||| | || | | ||||| ||| | ||| | || |||| | |||| || ||| Sbjct 1349 TCCA-AAGATGCTGCGCCTTGATT---GTTTTCTTTC-CTTTGCCTTCTTGCTCATATTT 1295 Query 62980 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATT-GTCCAGTCCAGGACATTCATCCG 63038 ||||| | | |||||| || || |||| | |||| || ||| ||||||| | | Sbjct 1294 AGTATAAAGTGTTTCGAATTCTTCACCCC-AGCATTCAAACAATCCTGGACATTGGTTTG 1236 Query 63039 GACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCC 63098 |||| | | | ||| || || || |||| |||| ||||| || | |||| | || Sbjct 1235 GACAAAAGAGGGTCCAGTCACCATCTTCCTCAACTCTCTTCATGAACAAATCACAGACCC 1176 Query 63099 AAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT-TTTAAG 63156 ||||||| ||| || | ||||| | ||| | ||| || || || ||||| ||||| Sbjct 1175 AAAGAGC-ATAGAACAAGTCTCTTGCTCTGTTTTCTTCTTTACCATGGTTCTTCTTTAAA 1117 Query 63157 ATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63215 || | || |||| || || | ||||| ||||| | || | ||| | | |||| Sbjct 1116 CTCAA--AAACTCATAGATGTCTGCGTGCCAAGGTTCGAGATAGACGGCAAAAGCTCCTT 1059 Query 63216 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63275 | || ||||| || || | |||||||| ||||| ||||| || || | ||||| Sbjct 1058 TTCTCTTACCACCTCCTTGGTCGACATATCTAGCAGTGTTGTTATAGACCCTGAGCATTG 999 Query 63276 GAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATAT 63335 | | | ||||| || | ||||| || ||| ||| ||| | || | || Sbjct 998 GGACTACTCCATTAGAGATTCCATTAGTGCCTCTGATGTAGGAGGATGTAGCTCTGATGC 939 Query 63336 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63395 | || | || || || || ||||| | |||||||| | || || |||| | | Sbjct 938 AATGGATAGCAAGTCCAATACCACCTGCGTTCTTAGAGATAATGGCACACTGTTTGAGAG 879 Query 63396 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 63455 | |||||||| || || ||| ||| || ||| ||||| ||| || | ||||| Sbjct 878 TGTCATAGATTCCTTCAATAGAATCCTCTTGCATCGCAAGTAAAAAGCACGAACTCATTT 819 Query 63456 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAG 63515 | | |||||| | |||||| | || || || || ||||| |||||||| | | Sbjct 818 GTGGTTTGGGAGTTCCTGAATTAAACAGAGTGGGGGATGCATGAGTGAACCATTTATTAC 759 Query 63516 AAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGA 63575 | | || ||| ||||||| ||| || |||| |||| | ||| ||||| | | | Sbjct 758 TCATCAAATCGTAAGTCTCAAAAGCAGACTCTAGATCCTTCTTATGGATTCCGATAGACA 699 Query 63576 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGG 63635 | | ||| ||||| || ||||| |||| |||||||| | | ||| | ||||| | Sbjct 698 CTCTCATCAACATTGTTTGTGGTCTCTCAATGATCTTGTCATGAACTTTTAGTAAGTAAG 639 Query 63636 ATTTTTCCAAAGTTTTAAAACCAAA 63660 || | || | |||||| || ||||| Sbjct 638 ATCTCTCGAGAGTTTTGAATCCAAA 614 >seq17286 Length=2746 Score = 179 bits (198), Expect = 5e-40 Identities = 709/1099 (65%), Gaps = 31/1099 (3%) Strand=Plus/Minus Query 62579 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62638 |||||||| ||||| || || ||||| | ||| || || |||||| ||||||| Sbjct 1698 CCTTGAACTCCAATTCCAATGGGTCTGTTTCTGAAGTTTGAATATTCAGCCTCTGGAACT 1639 Query 62639 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTT-TGACCACATC 62697 || ||||| ||| |||| |||| | |||| | | |||| | | | || || || Sbjct 1638 GGGTAATAGTTATTATCAATAACTCTATTCA-AGTTCTTAGTGATGGTCCTGGTTACTTC 1580 Query 62698 CTTCAGTTTGAGAAAATCAAATCGCCCATCT--ATT-ACAAACATGTTCAATGCAACAGA 62754 | || | | | || || || ||| ||| |||||| | ||| | || ||| Sbjct 1579 ATGGAGCCTATCATAGTCGAACACACCTTCTTCATTGACAAACCTTGCCAAGGAAATAGA 1520 Query 62755 TGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAG 62814 ||| ||||||||||| || |||| || ||| | |||| || || ||| ||| || Sbjct 1519 TGCAAGATTACAAACAGCAACCTGATCCTTATCTGTGTATTCCATAATTTCACAGCAGAG 1460 Query 62815 ATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 62874 || | |||||| ||||| | |||||| || ||| || | || | || || Sbjct 1459 GTTTGAGCTCTTGATAGTTCCAAGATTTTGCTGGTTAGATTTCCTATTGGCAGAGTCTTT 1400 Query 62875 ATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 62934 ||| || ||| |||| ||| || || ||||| ||||| ||||| || ||||||| | Sbjct 1399 ATAGAGCATGTATGGGACACCGGTCTCGATCTGGGATTCAATAATTGCGTTCCAGAGGTG 1340 Query 62935 TCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTATAGTGTATACAATCG 62991 | |||||| ||| || ||| || || |||| ||| ||| | ||||||||| Sbjct 1339 TTGAGCCT---TTACAGTCTTGACTCCTTTACCTTCTTCTTCATATTGAGTATACAATTT 1283 Query 62992 TTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGA 63051 ||| || || ||||||||| | || |||||| || |||| |||||| | | | Sbjct 1282 TTCAAATTCTTCTCCCCAACTTTCAAACAATCCAGGGCACTCATTCGGACAGAAGAGGGT 1223 Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAA 63110 ||| | || || || | |||| ||||| || || || | ||| | ||| || || Sbjct 1222 CCAGTTGCCATCCTCTTCAACTCTCTTCATGAACAGGTCTCAGACCCACATAGCGTAGAA 1163 Query 63111 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63170 || ||||| | ||| | ||| || || || |||||||| || | | |||| || Sbjct 1162 CAAG-TCTCTTGCTCTGTTTTCATCTTTACCATGGTTCTTTTTGAGGTTCAAGAAC-TCA 1105 Query 63171 TA-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63229 || ||||| | |||||| ||||| | || ||||| | | || | || ||| Sbjct 1104 TAGATATCTGCATGCCATGGTTCGAGATAGATGGCGAAGGCGCCTTTTCTCTTACCGCCT 1045 Query 63230 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 63289 || || || | ||||| || || | ||| | |||| | ||| || | | ||||| Sbjct 1044 CCTTGGTCAACATATCTTGCAGTATCATTGAAGACTCGAAGCATGGGCACCAATCCATTA 985 Query 63290 GATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA---- 63345 || || ||||| ||| || || | | | || || | | | ||| Sbjct 984 GAACGTCCGTTGGTTCCTCTAATGTA----AGAATTGGTCG-ATCTGATGCAGTGAACAG 930 Query 63346 -TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 63404 || || || || || || | |||||||| | || ||| | || || || ||||||| Sbjct 929 CAAGTCCAATACCTCCGGCATTCTTAGAGATAATAGCACATTGCTTCAATGTGTCATAGA 870 Query 63405 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA---CATTTGGTGAC 63461 | || |||||| ||||||| || || | || || ||| ||| |||||| | Sbjct 869 TTCCATCTATAGAATCATCCCGCA--TTGCG-AGCAAGAAGCAAGAACTCATTTGTGGTT 813 Query 63462 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTA 63521 |||||| | || || |||||||||| ||| || || |||||||| | | | | Sbjct 812 TTGGAGTTCCTGAGTTGAACAAGGTAGGAGTAGCATGGGTGAACCATTTGTTACTCATCA 753 Query 63522 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 63581 | || ||||||| || || || |||||| | || || || | | ||| | || Sbjct 752 AGTCATAAGTCTCAAAGGCAGACTCAATATCCTTCTTGTGGATACCAATAGAGACTCTCA 693 Query 63582 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63641 | | ||| ||| |||||||| || ||||||| | ||||| | | ||| ||| ||| Sbjct 692 TCAGCATTGTCTGTGGTCTTTCCACAATCTTGTCATCAATTTTTAGGAGGTAAGATCTTT 633 Query 63642 CCAAAGTTTTAAAACCAAA 63660 | | |||||| || || || Sbjct 632 CAAGAGTTTTGAATCCGAA 614 >seq11536 Length=1331 Score = 125 bits (138), Expect = 9e-24 Identities = 441/678 (65%), Gaps = 18/678 (3%) Strand=Plus/Plus Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416 ||| ||||| ||| ||||| |||| || | ||||| || ||||| || |||| Sbjct 118 CATGACTCCTGCTTTCTGGTACTCACTGACCTTCCTCTCGAAGAAGTTAGTCTTCCCTTG 177 Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476 | || || | ||||| | ||||||||||| | ||||| || | ||| || Sbjct 178 GAGAGAGATCATATCCATCCACTCGAATGGATTACTTACATTGTATAGTTTGGGGGCACC 237 Query 32477 CAATTCAGAAATCAA--TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 32534 || | ||| ||| ||| ||||| || || || || ||| |||| | || || Sbjct 238 -AAGTGTGAA-TCAGAGTCTGTCTGCTACGAACTCAATGTATTGGCTCATAAGTTTACTG 295 Query 32535 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 32594 ||||| || || |||| ||||| | | | ||| | ||||| ||||| || | || Sbjct 296 TTCATGCCGATGAGTTCGACTGGTAAGGACTCAGATACGAATTCGTGTTCGATCGCAACA 355 Query 32595 GCGTCTGTTATAAT-----AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTT 32649 || |||| || || ||||| | ||| || | || ||| || || | Sbjct 356 GCTTCTGACATGATCTCGTAGATCCTCTCGTTAG---ACACCTTGTTTACCATG--TGCT 410 Query 32650 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 32709 | | | ||| || |||||||| ||| || || || |||||| || |||||||| | Sbjct 411 TGTAAAGCAAGCAAGCGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAG 470 Query 32710 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA-TGAT 32768 | || ||||| ||||| | | |||||| |||||||| || | |||||| |||| Sbjct 471 AGAAGCAAAGTCCTGGCATCAAAGATCTCTTTTTGAGCCAAAAGATTG-CGCAAAATGAT 529 Query 32769 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 32828 || || || || |||||||| || |||||||| || || || || | | | || Sbjct 530 CCGGAGAAAAAGATTCCTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTATCG 589 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 || | | ||||| || |||||| || ||||||||||| || | || | || Sbjct 590 CTCTTGTTGATCCATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCA 649 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 ||||| || ||||| | | ||| || | || ||| ||| |||||||||| || Sbjct 650 ATAGCTTTGAAGAGGAAATCTTTCTCTTGTTCGTCACTAATATAGGTATCAATCAGGAGG 709 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || | || ||| ||||| || || |||| ||||||||||||||||| | Sbjct 710 GAGTAGGTCTCACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACT 769 Query 33009 TC-GGTAATCTGTACTTC 33025 || |||| | || ||||| Sbjct 770 TCTGGTACT-TGGACTTC 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633183808325200