Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq11536 141 1e-28 >seq11536 Length=1331 Score = 141 bits (156), Expect = 1e-28 Identities = 411/622 (66%), Gaps = 22/622 (4%) Strand=Plus/Plus Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 ||||| | ||||| || || || || || | ||||| |||| || ||||| || || Sbjct 410 TTGTAAAGCAAGCAAGCGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTA 469 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| | ||||| | || || || ||||||||||| |||| |||||| | Sbjct 470 GAGAAGCAAAGTCCTGGCATCAAAGATCTCTTTTTGAGCCAAAAGATTGC-GCAAAATGA 528 Query 93200 -CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258 || || ||||| || ||||| || ||||| || | | | ||| || || | | Sbjct 529 TCCGGAGAAAAAGATTCCTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTATC 588 Query 93259 GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAA---TA-CAAGGTA 93314 | || | |||||||||| | |||||| || || || || || | || ||| | Sbjct 589 GCTCTT---GTTGATCCATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATAT- 644 Query 93315 GTGTTTCGATAGCGTTAAATAGGTAATCTCGCTC--GTCCGAATCTCGTATGTATGTATC 93372 |||| ||||| || || ||| ||||| ||| || || || | || || ||||| Sbjct 645 ---TTTCAATAGCTTTGAAGAGGAAATCTTTCTCTTGTTCG--TCACTAATATAGGTATC 699 Query 93373 GATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAA 93432 || | || || || | ||| ||||| |||||||| | |||||||||||||||| Sbjct 700 AATCAGGAGGGAGTAGGTCTCACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAA 759 Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492 ||||| |||| | | || ||||| || || |||| | | || || ||| Sbjct 760 GCATCTCACTTCTGGTACTTGGACTTCAGAAGCGAAGTTCTCAATCAAGTTCTCGAGGAC 819 Query 93493 TATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC 93552 ||||| || || || ||||| || || | | | ||| || || ||| | |||||||| Sbjct 820 GATACCGTCTGAAGCAGCAAAGAAGGCAAGAACGTACTTAATGAAGTGTCTTTCATCATC 879 Query 93553 TTTAAGCTT---ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609 || ||||| || ||| || || ||| || ||| |||| || ||||| ||| Sbjct 880 ATTGAGCTTGTCATTCCAGTCTTTGAGGTCTGATGCAAGGTCGATCTCCTCGACTACCCA 939 Query 93610 AAACGATGCTT-CTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATA 93668 || | |||| |||| || |||||||| ||||| | || | || || ||||| || | Sbjct 940 GAAGCAAGCTTGCTGC-TTCTTGTACATCTCCCAGACATCCTTGTACTGGATTGGGAACA 998 Query 93669 TGACAAAACGATTAGGGTTATC 93690 ||| || | |||||||| || Sbjct 999 GGACGAACCTGTTAGGGTTGTC 1020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556466911473880