Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4252 93.3 9e-14 seq1478 93.3 9e-14 seq52457 87.8 4e-12 seq25603 87.8 4e-12 >seq4252 Length=677 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||||||||||||||| | ||||||| | |||||||||||||||||| Sbjct 171 AGCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGTTCGAG 112 Query 142563 CCCCAC 142568 |||||| Sbjct 111 CCCCAC 106 >seq1478 Length=486 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||||||||||||||| | ||||||| | |||||||||||||||||| Sbjct 163 AGCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGTTCGAG 104 Query 142563 CCCCAC 142568 |||||| Sbjct 103 CCCCAC 98 >seq52457 Length=761 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||| | Sbjct 434 GCCCGTCTAGCTCAGA-GGTAGAGCGCTAGACTTTTAATCTAGTGGTCGTGGGTTCGATC 376 Query 142564 CCCAC 142568 ||||| Sbjct 375 CCCAC 371 >seq25603 Length=716 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||| | Sbjct 400 GCCCGTCTAGCTCAGA-GGTAGAGCGCTAGACTTTTAATCTAGTGGTCGTGGGTTCGATC 342 Query 142564 CCCAC 142568 ||||| Sbjct 341 CCCAC 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027091596799667