Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq49069 152 9e-32 seq49392 132 9e-26 seq741 123 5e-23 seq53863 113 8e-20 seq2010 113 8e-20 seq10326 96.9 6e-15 seq4252 86.0 1e-11 seq1478 86.0 1e-11 >seq49069 Length=388 Score = 152 bits (168), Expect = 9e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || || || || |||||||||||||| ||||| || || || || || Sbjct 19 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAGAGAGTTCTTCCGTCCTCA 78 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || ||||| ||||||||||| ||||| ||||| || |||||||| || ||| Sbjct 79 AGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGA 138 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | |||||| || || ||||| | || || || | ||| ||||| || Sbjct 139 ATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACATCGAGGGTAATGGTCTTA 198 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| ||||| || ||||| Sbjct 199 CCAGTAAGGGTCTTTACGAAGATTTGCAT 227 >seq49392 Length=484 Score = 132 bits (146), Expect = 9e-26 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || || || ||||||||||||||||| ||||| | || || ||||| Sbjct 331 CAAGACCAAATGGAGGGTACTTTCTTTTTGGATGTTATAGTCGGACAAGGTTCTGCCATC 390 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || | ||||| || ||||| ||||||||||| ||||| |||||||| ||||| ||||| Sbjct 391 CTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATACCTTCTTTGTC 450 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 ||||||||| | ||| ||| || |||||||| Sbjct 451 TTGAATCTTAGTCTTTACGTTGTCAATGGTGTC 483 >seq741 Length=354 Score = 123 bits (136), Expect = 5e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 68271 TCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAAT 68330 ||||| || || || || || || | ||| || ||||| || | ||||| || ||||| Sbjct 3 TCTTTCTGAATATTGTAGTCTGACAATGTTCTTCCATCCTCAAGTTGCTTTCCAGCGAAG 62 Query 68331 ATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCC 68390 || |||||||| ||||| ||||| || |||||||| || |||||||| | ||||||| Sbjct 63 ATAAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGAATCTTGGTCTTGACGTTG 122 Query 68391 TCGATGGTGTCTG-CTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449 || || ||||| ||| | | || || | || || || ||||| ||||||||||| || Sbjct 123 TCAATAGTGTCGCTCTGCT-CGACATCAAGAGTAATAGTCTTTCCAGTGAGGGTCTTCAC 181 Query 68450 GAATATCTGCAT 68461 ||| || ||||| Sbjct 182 GAAGATTTGCAT 193 >seq53863 Length=275 Score = 113 bits (124), Expect = 8e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || || || ||||||||||| || || ||||| || || || ||||| Sbjct 127 ACCAAGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTTCCGTCTTCC 186 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || ||||| || | |||||| || || || ||||| |||||||| ||||| Sbjct 187 AATTGCTTTCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATACCTTCCTTATCTTGG 246 Query 68373 ATCTTTGCCTTGACG 68387 ||||| | ||| ||| Sbjct 247 ATCTTGGTCTTTACG 261 >seq2010 Length=934 Score = 113 bits (124), Expect = 8e-20 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || |||||||| || |||||||| ||||||||||| || || |||||||| || || Sbjct 344 GTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTTCTTCCATCTTCCAATTG 285 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || | |||||| ||||| ||||| || |||||||| ||||| || || Sbjct 284 CTTTCCTGCAAAAATTAATCTTTGCTGGTCAGGTGGGATACCTTCCTTATCTTGGATTTT 225 >seq10326 Length=2715 Score = 96.9 bits (106), Expect = 6e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || || ||||||||||| || ||||| ||||| | || || | |||| || Sbjct 2119 GTAGATTCCTTCTGGATGTTATAGTCAGAGAGAGTCCTGTCGTCCTCGAGGGGCTTACCT 2178 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| | ||||| || |||| ||| || ||||| | || ||||| | ||| Sbjct 2179 GCGAAGACAAGTCTCTGGCTTTCGGCTGGGATACCTTCTCTCTCCATGATCTTAGTCTTA 2238 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || | | |||||| || | | ||| | | ||||||||||| ||||| ||||||||| Sbjct 2239 ACAGTGTTGATGGTATCGGTTTGTTCAGCATTGAAGGTGATGGTCTTTCCAGTGAGGGTC 2298 Query 68445 TTGACGAATATCTGCATT 68462 || |||| | ||||||| Sbjct 2299 TTAGCGAAGAGCTGCATT 2316 >seq4252 Length=677 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||||| Sbjct 170 GCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGTTCGAGC 111 Query 84516 CCCAC 84520 ||||| Sbjct 110 CCCAC 106 >seq1478 Length=486 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||||| Sbjct 162 GCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGTTCGAGC 103 Query 84516 CCCAC 84520 ||||| Sbjct 102 CCCAC 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920970501915640