Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq17286 118 1e-21 seq29984 111 2e-19 seq11536 91.5 2e-13 >seq17286 Length=2746 Score = 118 bits (130), Expect = 1e-21 Identities = 665/1053 (63%), Gaps = 24/1053 (2%) Strand=Plus/Minus Query 114285 CATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAG 114344 |||| ||||||||||| || || | ||||| || | | ||| | || || | | || Sbjct 1709 CATCAGCGAGACCTTGAACTCCAATTCCAATGGGTCTGTTTCTGAAGTTTGAATATTCAG 1650 Query 114345 CGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 114403 | ||| | | || ||| | || |||| ||||| ||||| | || || |||| | Sbjct 1649 CC-TCTGGAACTGGGTAATAGTTATTATCAATAACTCTATTCAAGTTCTTAGTGATGGTC 1591 Query 114404 TTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCATTGACATACTT 114462 | || | |||||| ||| | || || || || || | |||||||||||| || | Sbjct 1590 CTGGTTACTTCATGGAGCCTATCATAGTCGAACACACCT----TCTTCATTGACAAACCT 1535 Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 114522 | | || || || || |||||||| |||| || ||||||||| ||||| || || Sbjct 1534 TGCCAAGGAAATAGATGCAAGATTACAAACAGCAACCTGATCCTTATCTGTGTATTCCAT 1475 Query 114523 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 114582 |||||| || | ||||| ||||| || || || | || | || || || || | Sbjct 1474 AATTTCACAGCAGAGGTTTGAGCTCTTGATAGTTCCAAGATTTTGCTGGTTAGATTTCCT 1415 Query 114583 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 114642 || | || || || ||||||||||| || ||||| | ||||| | | ||| Sbjct 1414 ATTGGCAGAGTCTTTATAGAGCATGTATGGGACACCGGTCTCGATCTGGGATTCAATAAT 1355 Query 114643 AGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTC---GCCCCTCCTCCTCGTA 114699 || ||||||| | || ||||| ||| ||| || || || || || Sbjct 1354 TGCGTTCCAGAGGTGTTGAGCCTTTACAGT---CTTGACTCCTTTACCTTCTTCTTCATA 1298 Query 114700 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATC 114759 | || || | |||||| ||||| ||| || | | || || || || Sbjct 1297 TTGAGTATACAATTTTTCAAATTCTTCTCCCCAACTTTCAAACAATCCAGGGCACTCATT 1238 Query 114760 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGAT 114819 || |||||||| | ||| | ||| |||| ||||| | ||||||||| |||||| || Sbjct 1237 CGGACAGAAGAGGGTCCAGTTGCCATCCTCTTCAACTCTCTTCATGAACAGGTCTCAGAC 1178 Query 114820 CCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 114879 ||| | ||| |||| | || | | ||| || | || || || | Sbjct 1177 CCACATAGCGTAGAACAAGTCTCTTGCTCTGTTTTCATCTTTACCATGGTTCTTTTTGAG 1118 Query 114880 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 114939 | ||| || || |||||| || ||||| ||||| || || | |||| | || || Sbjct 1117 GTTCAAGAACTCATAGATATCTGCATGCCATGGTTCGAGATAGATGGCGAAGGCGCCTTT 1058 Query 114940 AC---GACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGG 114996 | || || | |||| ||||| || || || |||| || || |||||||| || Sbjct 1057 TCTCTTACCGCCTCCTTGGTCAACATATCTTGCAGTATCATTGAAGACTCGAAGCATGGG 998 Query 114997 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 115056 | | |||| ||| | || || || || | ||| ||| || | | ||||| | Sbjct 997 CACCAATCCATTAGAACGTCCGTTGGTTCCTCTAATGTAAGAATTGGTCGATCTGA-TGC 939 Query 115057 ATGGATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 115115 | || || | |||||||| || || ||| ||||| || || | | | | Sbjct 938 AGTGAACAGCAAGTCCAATACCTCCGGCATTCTTAGAGATAATAGCACATTGCTTCAATG 879 Query 115116 TGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTT 115175 || | ||||| || || || || ||| || |||||| | |||||| ||||| Sbjct 878 TGTCATAGATTCCATCTATAGAATCATCCCGCATTGCGAGCAAGAAGCAAGAACTCATTT 819 Query 115176 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGG 115234 |||| |||| || || | |||||| | ||| || || || ||| |||| ||| ||| Sbjct 818 GTGGTTTTGGAGTTCCTGAGTTGAACAAGGTAGGAGTAGCATGGGTGAACCAT---TTGT 762 Query 115235 GA--CATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCG 115292 | |||| || || ||||| ||| | | ||| || | | ||| ||||| || | Sbjct 761 TACTCATCAAGTCATAAGTCTCAAAGGCAGACTCAATATCCTTCTTGTGGATACCAATAG 702 Query 115293 AGACCCGCATAAACATGTATTGGGGTGTTTCCA 115325 |||| | ||| | ||| || ||| |||||| Sbjct 701 AGACTCTCATCAGCATTGTCTGTGGTCTTTCCA 669 >seq29984 Length=2719 Score = 111 bits (122), Expect = 2e-19 Identities = 498/778 (64%), Gaps = 16/778 (2%) Strand=Plus/Minus Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430 || ||||| ||||| | ||| ||||| | | | |||| | ||||||||||| ||| Sbjct 1623 TCAATAACTCTATTCAAATTCTTGGTAATAGTCCTTGTAACAGAGTGAAGCTTTTCATAA 1564 Query 114431 TCAAA-ACTGCGAGTCTCTTCATTGACATAC-TTAGGAAGGGCGATTGACGCCAGATTAC 114488 || || ||| | || |||||||| || ||| || | || || ||||| || | Sbjct 1563 TCGAAGACTCCT----TCATCATTGACGAACCTTACTAAAGAA-ATAGATGCCAGGTTGC 1509 Query 114489 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 114548 | |||| | ||| |||||||| || || |||| || || | ||| || || | Sbjct 1508 AGACAGCTACTTGATCTTTATCAGTATATTCCATAACCTCACAGCAAAGATTCGAGCTTT 1449 Query 114549 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 114608 | || || || | |||| |||||| || || |||| | ||||| || ||||||| Sbjct 1448 TGATAGTTCCAAGATTCTGTTGATTAGATTTCTTGTTGGCAGAGTCCTTATAGAGCATGT 1389 Query 114609 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT-CGGCGGCTGGC 114667 |||| ||| ||||| | ||||| | | |||||| ||||| | || | ||| || | Sbjct 1388 ATGGAACCCCTGTCTCAATCTGGGATTCAATAATAGCATTCCAAAGATGCTGCGCCTTG- 1330 Query 114668 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 114727 | || || || || || | ||| || || || || || | ||| || |||||| Sbjct 1329 ATTGTTTTCTTTCCTTTGCCTTCTTGCTCATATTTAGTATAAAGTGTTTCGAATTCTTCA 1270 Query 114728 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 114787 ||| | || | | ||||| | | ||| || ||||| | ||| | |||| | Sbjct 1269 CCCCAGCATTCAAACAATCCTGGACATTGGTTTGGACAAAAGAGGGTCCAGTCACCATCT 1210 Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAG 114847 |||||||| | ||||||||| | || || ||| ||||| |||| | || | Sbjct 1209 TCCTCAACTCTCTTCATGAACAAATCACAGACCCAAAGAGCATAGAACAAGTCTCTTGCT 1150 Query 114848 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 114907 | |||||| | || || || || |||||| || ||| || |||||| Sbjct 1149 CTGTTTTCTTCTTTACCATGGTTCTTCTTTAAACTCAAAAACTCATAGATGTCTGCGTGC 1090 Query 114908 CACGGTTCCAGGTACACCGCGATTGACCCCTTAC---GACGACCAGCCTGGTTTACATAC 114964 || ||||| || || || || | | || || | || ||| | |||| ||||| Sbjct 1089 CAAGGTTCGAGATAGACGGCAAAAGCTCCTTTTCTCTTACCACCTCCTTGGTCGACATAT 1030 Query 114965 CTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT- 115023 || || ||| ||| | || | |||||||| | | |||| ||| ||||| || Sbjct 1029 CTAGCAGTGTTGTTATAGACCCTGAGCATTGGGACTACTCCATTAGAGATTCCATTAGTG 970 Query 115024 CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTG 115082 || | || || ||| | | ||||||| |||||| | |||||||| |||| Sbjct 969 CCTCTGATGTAGGAGGAT--GTAGCTCTGATGCAATGGATAGCAAGTCCAATACCACCTG 912 Query 115083 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTC 115140 | ||| ||||| || |||| ||||| || | ||||| || || || || || Sbjct 911 CGTTCTTAGAGATAATGGCACACTGTTTGAGAGTGTCATAGATTCCTTCAATAGAATC 854 >seq11536 Length=1331 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || || || || | ||||| | ||| || |||||||| ||||||||||| | | Sbjct 436 GTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGTCCTGGCATCAAAGA 495 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 | ||| || | ||| || || || |||||||| || ||||| |||||||| || ||||| Sbjct 496 TCTCTTTTTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAAAGATTCCTTCGACACA 555 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAG 126205 || || || | ||| | ||||| ||| Sbjct 556 GGCAAAGGCGATGAGCCTTTCAGCGAAG 583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596931069397960