Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq49069 102 9e-17 seq741 87.8 2e-12 >seq49069 Length=388 Score = 102 bits (112), Expect = 9e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || || ||||| | ||||| | |||| || || ||||| |||||||| Sbjct 37 TCCTTCTGGATGTTATAATCTGAGAGAGTTCTTCCGTCCTCAAGTTGCTTTCCAGCGAAG 96 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 ||||||| |||||||| | ||| | | ||||| ||| ||| | || || |||| | Sbjct 97 ATGAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCC-TGAATCTTAGTCTTGACATT 155 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||||| || ||||||| || ||||| || || || || |||||||| Sbjct 156 GTCAATAGTGTCGCTTTGCTCGACATCGAGGGTAATGGTCTTACCAGTAAGGGTCTTTAC 215 Query 42197 AAAGATTTGCATTTT 42211 ||||||||||| || Sbjct 216 GAAGATTTGCATATT 230 >seq741 Length=354 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || ||||||||||| || | || || | | || || || ||||| |||||||| Sbjct 3 TCTTTCTGAATATTGTAGTCTGACAATGTTCTTCCATCCTCAAGTTGCTTTCCAGCGAAG 62 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 || |||| |||||||| | ||| | | ||||| ||| ||| | || || |||| ||| Sbjct 63 ATAAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCC-TGAATCTTGGTCTTGA-CGT 120 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||||||| || ||||| | || || || || || || || ||||| | Sbjct 121 TGTCAATAGTGTCGCTCTGCTCGACATCAAGAGTAATAGTCTTTCCAGTGAGGGTCTTCA 180 Query 42196 CAAAGATTTGCATTTT 42211 | ||||||||||| || Sbjct 181 CGAAGATTTGCATATT 196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542828565216080