Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq10326 87.8 2e-12 >seq10326 Length=2715 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| || || | ||||| || || || || || |||||||| || | || ||| | | Sbjct 2328 TCTGAGAACCAAGTGAATTGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCC 2387 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||||||| ||||| || ||| | ||||||| |||||||| | |||||||||||| | Sbjct 2388 GTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTTTGCTGGTCAGCTGGAATTCCTTCTCT 2447 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||| | || | ||||||| || || || | || | Sbjct 2448 CTCCTGCATCTTGGTCTTGATTGTGTCAATTGTATCAGATTGCTCGACATCGAGGGTCAT 2507 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || ||||| || || || || |||||||| Sbjct 2508 TGTCCTACCAGTCAAGGTCTTAACAAAGATTTGCAT 2543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499291382496280