Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq29984 123 2e-23 >seq29984 Length=2719 Score = 123 bits (136), Expect = 2e-23 Identities = 210/302 (70%), Gaps = 2/302 (1%) Strand=Plus/Plus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 ||||||||| | || || ||||| | ||| || || | ||||| |||||| |||||| Sbjct 956 TCCTACATCAGAGGCACTAATGGAATCTCTAATGGAGTAGTCCCAATGCTCAGGGTCTAT 1015 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 |||||| | || | || || ||||| || ||||| | ||| || || |||| || ||| Sbjct 1016 AACAACACTGCTAGATATGTCGACCAAGGAGGTGGTAAGAGAAAAGGAGCTTTTGCCGTC 1075 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGA-AAGAACCACGG 94247 |||||||| || |||||||| ||| | | | || | || | | |||||||| || Sbjct 1076 TATCTCGAACCTTGGCACGCAGACATCTATGAGTT-TTTGAGTTTAAAGAAGAACCATGG 1134 Query 94248 CAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTAT 94307 || || | || || |||||| | ||||| ||||| ||||| || | || || Sbjct 1135 TAAAGAAGAAAACAGAGCAAGAGACTTGTTCTATGCTCTTTGGGTCTGTGATTTGTTCAT 1194 Query 94308 GAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 ||| | || ||| || | | ||||| || |||||||| || ||||||| ||| | Sbjct 1195 GAAGAGAGTTGAGGAAGATGGTGACTGGACCCTCTTTTGTCCAAACCAATGTCCAGGATT 1254 Query 94368 GT 94369 || Sbjct 1255 GT 1256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494373263728520