Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq49069 129 4e-25 >seq49069 Length=388 Score = 129 bits (142), Expect = 4e-25 Identities = 181/253 (72%), Gaps = 1/253 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| | ||| | || || ||||||||||| || || || ||||| ||||| | Sbjct 1 CCTCCTCTGAGTCTGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAG 60 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| |||| || | ||| || |||||| | || | | || ||||| ||| Sbjct 61 AGAGTTCTTCCGTCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGG 120 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || ||| || | || ||| | || ||||| ||||| | || || Sbjct 121 ATACCTTCCTTATCCTGAATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACA 180 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT-GAAATAAA 15188 || | ||||||||| ||||| || || || ||||| || |||||||||||| || ||| Sbjct 181 TCGAGGGTAATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCATATTTCTTAAAAAA 240 Query 15189 TTTTTTAATACTT 15201 | ||||| || || Sbjct 241 TATTTTATTAATT 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357145523155295