Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq12826 91.5 1e-13 seq53863 89.7 5e-13 >seq12826 Length=774 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || | ||| || | || || || || || || ||||| ||||| || || ||| | Sbjct 331 CCGCCTCTGAGTCTGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 272 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| | ||| |||||||| ||||| || | || |||| ||||||||| || ||| Sbjct 271 AGGGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAATCTTTGCTGGTCTGGTGGA 212 Query 45234 ATGCCTTCTTTATCTTGAATTTT 45256 || |||||||||||||| || || Sbjct 211 ATACCTTCTTTATCTTGGATCTT 189 >seq53863 Length=275 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||||||||||||||| || || || || ||| | || |||||||| Sbjct 133 TGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTTCCGTCTTCCAATTGC 192 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||||| ||| | ||||||| |||||| || || ||||| ||||| |||||||| || || Sbjct 193 TTTCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATACCTTCCTTATCTTGGATCTT 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451683481186520