Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq17286 127 3e-24 seq29984 107 2e-18 >seq17286 Length=2746 Score = 127 bits (140), Expect = 3e-24 Identities = 665/1052 (63%), Gaps = 22/1052 (2%) Strand=Plus/Minus Query 116246 CATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAG 116305 |||| ||||||||||| || || | ||||| || | | ||| | || || | | || Sbjct 1709 CATCAGCGAGACCTTGAACTCCAATTCCAATGGGTCTGTTTCTGAAGTTTGAATATTCAG 1650 Query 116306 CGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 116364 | ||| | | || ||| | || |||| ||||| ||||| | || || |||| | Sbjct 1649 CC-TCTGGAACTGGGTAATAGTTATTATCAATAACTCTATTCAAGTTCTTAGTGATGGTC 1591 Query 116365 TTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCATTGACATACTT 116423 | || | |||||| ||| | || || || || || | |||||||||||| || | Sbjct 1590 CTGGTTACTTCATGGAGCCTATCATAGTCGAACACACCT----TCTTCATTGACAAACCT 1535 Query 116424 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 116483 | | || || || || |||||||| |||| || ||||||||| ||||| || || Sbjct 1534 TGCCAAGGAAATAGATGCAAGATTACAAACAGCAACCTGATCCTTATCTGTGTATTCCAT 1475 Query 116484 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 116543 |||||| || | ||||| ||||| || || || | || | || || || || | Sbjct 1474 AATTTCACAGCAGAGGTTTGAGCTCTTGATAGTTCCAAGATTTTGCTGGTTAGATTTCCT 1415 Query 116544 GTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603 || | || || |||||||| ||||| || ||||| | ||||| | | ||| Sbjct 1414 ATTGGCAGAGTCTTTATAGAGCATGTATGGGACACCGGTCTCGATCTGGGATTCAATAAT 1355 Query 116604 AGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTC---GCCCCTCCTCCTCGTA 116660 || ||||| | | || ||||| ||| ||| || || || || || Sbjct 1354 TGCGTTCCAGAGGTGTTGAGCCTTTACAGT---CTTGACTCCTTTACCTTCTTCTTCATA 1298 Query 116661 CTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATC 116720 | || || | ||||| ||||| ||| | || | | || || || || Sbjct 1297 TTGAGTATACAATTTTTCAAATTCTTCTCCCCAACTTTCAAACAATCCAGGGCACTCATT 1238 Query 116721 TGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 116780 ||||||||||| | ||| | ||| |||| ||||| | ||||||||| |||||| || Sbjct 1237 CGGACAGAAGAGGGTCCAGTTGCCATCCTCTTCAACTCTCTTCATGAACAGGTCTCAGAC 1178 Query 116781 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 116840 ||| | || |||| | || | | ||| || | || || || | Sbjct 1177 CCACATAGCGTAGAACAAGTCTCTTGCTCTGTTTTCATCTTTACCATGGTTCTTTTTGAG 1118 Query 116841 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 116900 | ||| || || |||||| || ||||| ||||| || || | |||| | || || Sbjct 1117 GTTCAAGAACTCATAGATATCTGCATGCCATGGTTCGAGATAGATGGCGAAGGCGCCTTT 1058 Query 116901 GC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957 | || || | |||| ||||| || || || | || || || |||||||| || Sbjct 1057 TCTCTTACCGCCTCCTTGGTCAACATATCTTGCAGTATCATTGAAGACTCGAAGCATGGG 998 Query 116958 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATC 117017 | | |||| ||| | || || || || | ||| ||| ||| | | ||||| Sbjct 997 CACCAATCCATTAGAACGTCCGTTGGTTCCTCTAATGTAAGAATTGGTCGATCTGATGCA 938 Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077 ||| | | |||||||| || || ||| ||||| || || | | | | | Sbjct 937 GTGAACAGCAAGTCCAATACCTCCGGCATTCTTAGAGATAATAGCACATTGCTTCAATGT 878 Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 | | ||||| ||||| || || ||| || |||||| | |||||| |||||| Sbjct 877 GTCATAGATTCCATCTATAGAATCATCCCGCATTGCGAGCAAGAAGCAAGAACTCATTTG 818 Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGGG 117196 ||| |||| || || | |||||| | ||| || || || ||| |||| ||| ||| Sbjct 817 TGGTTTTGGAGTTCCTGAGTTGAACAAGGTAGGAGTAGCATGGGTGAACCAT---TTGTT 761 Query 117197 A--CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254 | |||| || || ||||| ||| |||| ||| || | | ||| ||||| || || Sbjct 760 ACTCATCAAGTCATAAGTCTCAAAGGCAGACTCAATATCCTTCTTGTGGATACCAATAGA 701 Query 117255 GACCCGCATAAACATGTATTGGGGTGTTTCCA 117286 ||| | ||| | ||| || ||| |||||| Sbjct 700 GACTCTCATCAGCATTGTCTGTGGTCTTTCCA 669 >seq29984 Length=2719 Score = 107 bits (118), Expect = 2e-18 Identities = 294/441 (67%), Gaps = 11/441 (2%) Strand=Plus/Minus Query 116332 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 116391 || ||||| ||||| | ||| ||||| | | | |||| | ||||||||||| ||| Sbjct 1623 TCAATAACTCTATTCAAATTCTTGGTAATAGTCCTTGTAACAGAGTGAAGCTTTTCATAA 1564 Query 116392 TC-AAAACTGCGAGTCTCTTCATTGAC-ATACTTAGGAAGGGCGATTGACGCCAGATTAC 116449 || || ||| | || |||||||| | |||| || | || || ||||| || | Sbjct 1563 TCGAAGACTCC----TTCATCATTGACGAACCTTACTAA-AGAAATAGATGCCAGGTTGC 1509 Query 116450 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 116509 | |||| | ||| |||||||| || || |||| || || | ||| || || | Sbjct 1508 AGACAGCTACTTGATCTTTATCAGTATATTCCATAACCTCACAGCAAAGATTCGAGCTTT 1449 Query 116510 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATAT 116569 | || || || | |||| |||||| || || |||| | ||||| |||||||| | Sbjct 1448 TGATAGTTCCAAGATTCTGTTGATTAGATTTCTTGTTGGCAGAGTCCTTATAGAGCATGT 1389 Query 116570 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACAT-CGGCGGCTGGC 116628 |||| ||| ||||| | ||||| | | |||||| ||||| | || | ||| || | Sbjct 1388 ATGGAACCCCTGTCTCAATCTGGGATTCAATAATAGCATTCCAAAGATGCTGCGCCTTG- 1330 Query 116629 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCA 116688 | || || || || || | ||| || || || || || | || || |||||| Sbjct 1329 ATTGTTTTCTTTCCTTTGCCTTCTTGCTCATATTTAGTATAAAGTGTTTCGAATTCTTCA 1270 Query 116689 CCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||| |||| || | | ||||| | | |||||| ||||| | ||| | |||| | Sbjct 1269 CCC-CAGCATTCAAACAATCCTGGACATTGGTTTGGACAAAAGAGGGTCCAGTCACCATC 1211 Query 116748 CTCCTCAACCCGCTTCATGAA 116768 |||||||| | ||||||||| Sbjct 1210 TTCCTCAACTCTCTTCATGAA 1190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613073243350920