Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq10326 113 1e-19 seq49069 104 6e-17 seq12826 102 2e-16 seq53863 98.7 2e-15 seq49392 96.9 8e-15 seq741 93.3 1e-13 seq2010 89.7 1e-12 >seq10326 Length=2715 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | ||| | || |||||||| |||| ||||||||||| | || ||| Sbjct 2326 AGTCTGAGAACCAAGTGAATTGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTT 2385 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||| || |||||||| || |||||||| | |||||||| | |||||||||| Sbjct 2386 CCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTTTGCTGGTCAGCTGGAATTCCTTCT 2445 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 | |||||| ||||| ||| | | || | || || | | || ||||| | || Sbjct 2446 CTCTCCTGCATCTTGGTCTTGATTGTGTCAATTGTATCAGATTGCTCGACATCGAGGGTC 2505 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||| |||| || | || || ||||| ||||| Sbjct 2506 ATTGTCCTACCAGTCAAGGTCTTAACAAAGATTTG 2540 >seq49069 Length=388 Score = 104 bits (114), Expect = 6e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| ||||| | ||| || || || ||||| |||| ||| || || | | ||| ||| Sbjct 10 AGTCTGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAGAGAGTTCTT 69 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || || || || |||||||| ||||||||||| | |||||||| || || ||||| Sbjct 70 CCGTCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGGATACCTTCC 129 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||||||||| ||| || || | ||||| || || ||||| | || Sbjct 130 TTATCCTGAATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACATCGAGGGTA 189 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || ||||| Sbjct 190 ATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTG 224 >seq12826 Length=774 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| ||||| ||||||||||| |||||||| |||| ||||||||| | | || ||| Sbjct 322 AGTCTGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTT 263 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||| |||||||| || || || | | |||||||| || ||| |||||| Sbjct 262 CCATCTTCCAATTGCTTTCCAGCAAAAATTAATCTTTGCTGGTCTGGTGGAATACCTTCT 203 Query 199532 CGCTCCTGAATCTT 199545 || || ||||| Sbjct 202 TTATCTTGGATCTT 189 >seq53863 Length=275 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | |||||| || || |||||||||| ||||||||||| | ||| ||||| Sbjct 120 TCTGAGGACCAAGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTTCC 179 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||||| |||||||| |||||||| | | ||||| || ||| ||| ||||| Sbjct 180 GTCTTCCAATTGCTTTCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATACCTTC 236 >seq49392 Length=484 Score = 96.9 bits (106), Expect = 8e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||| | ||||| || || ||||||| ||| ||||| | ||| || || Sbjct 326 AGTCTCAAGACCAAATGGAGGGTACTTTCTTTTTGGATGTTATAGTCGGACAAGGTTCTG 385 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || || |||||||| ||||||||||| | |||||||| || ||| |||||| Sbjct 386 CCATCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATACCTTCT 445 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 || |||||||| ||| ||| || | |||||| Sbjct 446 TTGTCTTGAATCTTAGTCTTTACGTTGTCAATGGTGTC 483 >seq741 Length=354 Score = 93.3 bits (102), Expect = 1e-13 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 199451 TTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGC 199510 |||||||| | ||| || |||||||| || || |||||||| |||||||| || | ||| Sbjct 15 TTGTAGTCTGACAATGTTCTTCCATCCTCAAGTTGCTTTCCAGCGAAGATAAGTCTTTGC 74 Query 199511 TGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCT 199570 ||||| || || ||||| ||||||||||| ||| ||| || | ||||| Sbjct 75 TGGTCTGGTGGGATACCTTCCTTATCCTGAATCTTGGTCTTGACGTTGTCAATAGTGTCG 134 Query 199571 GTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || ||||| | || || ||||| || ||||| || ||||| || ||||| Sbjct 135 CTCTGCTCGACATCAAGAGTAATAGTCTTTCCAGTGAGGGTCTTCACGAAGATTTG 190 >seq2010 Length=934 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| ||||| ||||||||||| |||||||| |||| |||||| || | | || ||| Sbjct 358 AGTCTGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTTCTT 299 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||||||||| |||||||| || || || | | |||||||| || Sbjct 298 CCATCTTCCAATTGCTTTCCTGCAAAAATTAATCTTTGCTGGTCAGG 252 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | || || || |||||||| |||||||||||||| || | ||||||||||| Sbjct 262 AAAGATTAATTTTTGCAGGAAAGCAATTGGAAGATGGAAGAACCCTCTCCGATTACAACA 321 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 201026 ||||||| ||||| ||||| ||||| || | ||||| Sbjct 322 TCCAGAAGGAGTCCACTCTCCACCTCGTCCTCAGACT 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178066857156329