Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq29984 150 2e-31 >seq29984 Length=2719 Score = 150 bits (166), Expect = 2e-31 Identities = 905/1425 (64%), Gaps = 57/1425 (4%) Strand=Plus/Plus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||||| ||| | || | ||||| |||||| | | ||| | || |||| ||| ||||| Sbjct 686 ATGTTGATGAGAGTGTCTATCGGAATCCATAAGAAGGATCTAGAGTCTGCTTTTGAGACT 745 Query 111681 TACGACAAGATGTCCCGTGGTAT---GTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 ||||| |||| || || ||||| || ||| | || || || || || | Sbjct 746 TACGATTTGATGA---GTAATAAATGGTTCACTCATGCATCCCCCACTCTGTTTAATTCA 802 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTAT---TGCAAACAAGGAGGATTCA 111794 || || || | ||| |||||| |||| | | || | ||| | | |||||||| Sbjct 803 GGAACTCCCAAACCACAAATG---AGTTCGTGCTTTTTACTTGCGATGCAAGAGGATTCT 859 Query 111795 ATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGT 111854 || | || || || | |||||||| | |||||| ||||| ||| || |||||| Sbjct 860 ATTGAAGGAATCTATGACACTCTCAAACAGTGTGCCATTATCTCTAAGAACGCAGGTGGT 919 Query 111855 ATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATG 111912 || || | |||||| ||||||| | | ||| || | ||||| || |||| Sbjct 920 ATTGGACTTGCTATCCATTGCATCAGAGCTAC--ATCCTCCTACATCAGAGGCACTAATG 977 Query 111913 GTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAA 111972 | || |||| | | |||||||| | || | |||| ||| || | ||||| Sbjct 978 GAATCTCTAATGGAGTAGTCCCAATGCTCAGGGTCTATAACAACACTGCTAGATATGTCG 1037 Query 111973 ACCAAGCTGGGCGTC---GCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGG 112029 |||||| || || | || ||| || | || |||||||| || || |||||||| | Sbjct 1038 ACCAAGGAGGTGGTAAGAGAAAAGGAGCTTTTGCCGTCTATCTCGAACCTTGGCACGCAG 1097 Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTC-AACCAAGGTGATGAGGAGGCGCGGTGCC-G 112087 | ||| ||||| ||||||| ||||| ||| | || || | | || | Sbjct 1098 ACATCTATGAGTTT-TTGAGTTTAAAGAAGAACCATGGTAAAGAAGAAAA-CAGAGCAAG 1155 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 || | |||| ||||| ||| | ||| | |||||||||||||||||||| ||| Sbjct 1156 AGACTTGTTCTATGCTCTTTGGGTCTGTGATTTGTTCATGAAGAGAGTTGAGGAAGATGG 1215 Query 112148 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGG 112206 | ||| | |||||||||||| || | || || | | || ||| | |||||| | Sbjct 1216 TGACTGGACCCTCTTTTGTCCAAACCAATGTCCAGGATTGTTTGAATGCTG-GGGTGAAG 1274 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266 | || ||| | || || || || || ||| ||||| | | | || | | || Sbjct 1275 AATTCGAAACACTTTATACTAAATATGAGCAAGAAGGCAAAGGAAAGAAAACAAT-CAAG 1333 Query 112267 CTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATG 112325 || | || | ||||| |||||| | | || || | ||||| || ||||| ||| Sbjct 1334 GCGCAGCATCTTTGGAATGCTATTATTGAATCCCAGATTGAGACAGGGGTTCCATACATG 1393 Query 112326 CTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGT 112385 || || || ||| | ||| | || ||||||| ||||| | || ||||| || Sbjct 1394 CTCTATAAGGACTCTGCCAACAAGAAATCTAATCAACAGAATCTTGGAACTATCAAAAGC 1453 Query 112386 TCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAAC 112445 || || || || || | |||||| ||| || |||||| | ||||| || ||| Sbjct 1454 TCGAATCTTTGCTGTGAGGTTATGGAATATACTGATAAAGATCAAGTAGCTGTCTGCAAC 1513 Query 112446 CTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTGATTATGA 112504 || ||||| || || | | || || || || || || | || |||||||| Sbjct 1514 CTGGCATCTATTTCTTTAGTAAGGTTCGTCAAT---GATGAAGGAGTC-TTCGATTATGA 1569 Query 112505 AAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAA 112564 ||| || ||| ||||| | ||| | || || || | || ||||||||||| | || Sbjct 1570 AAAGCTTCACTCTGTTACAAGGACTATTACCAAGAATTTGAATAGAGTTATTGACAATAA 1629 Query 112565 TTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 112621 | |||||| | ||| ||| | || || | ||| || | || ||||| | Sbjct 1630 CTATTACCCAATCCCTGAAGCTGAATAT---TCGAACTTTAGAAACAGACCTATTGGAAT 1686 Query 112622 CGGTGTCCAAGGTCTCGCGGATGTAT-TCATTCTTTGTCGCCACGCATTTGATTCCGACG 112680 ||||| ||||| | || |||| | ||| || | ||||||| || | Sbjct 1687 TGGTGTTCAAGGATTAGCTGATGCTTATCAAAGAATGAAAATTC-CATTTGAGAGTGAAG 1745 Query 112681 AAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGA 112740 |||| | || || | || || ||||| || || || || || ||||| | | Sbjct 1746 AAGCTACCGATGCTAACAAGAAGATCTTCGAGACTATCTACCATGCTGC-CTTGA--CAA 1802 Query 112741 GTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797 || || || ||| ||| || || | ||||| || || || || ||| | Sbjct 1803 TGTCCTGCGATTTAGCAAAGGAAGAAGGACACTATGAGACATTCCCAGGATCCCCAATCT 1862 Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACT-------AC 112850 | ||||| | | || |||||| | |||||| || |||| | |||| | Sbjct 1863 CTCAAGGAAAGTTGCAGTTTGATCTCTGGGAAAAGGA-ACCA---TACACTGATAGATAT 1918 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 |||||||| ||||| | ||| ||||| ||| | ||| || | ||| ||| ||| | Sbjct 1919 GACTGGGATGCTCTGAGAGAAGAAATCAAAGAGCATGGTGTTAGAAACTCTCTATTGGTT 1978 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || ||||||||||| ||| || | ||| | | || |||||||| |||||||||| Sbjct 1979 GCTCCAATGCCAACTGCCAGTACTTCTCAAGTTCTAGGAAATAATGAGAGCTTTGAACCT 2038 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 113015 || || | || || || ||||||| || || ||||||||| Sbjct 2039 TATACTTCCAATATTTACACGAGAAGAGTTCTTGCAGGAGAGTTT 2083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620303325622640