Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq17286 172 6e-38 seq29984 122 1e-22 seq11536 100 3e-16 >seq17286 Length=2746 Score = 172 bits (190), Expect = 6e-38 Identities = 1041/1642 (63%), Gaps = 47/1642 (3%) Strand=Plus/Minus Query 109423 CCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTGTC 109482 || || ||||||||| |||||| || || | |||||| ||| | || | || ||| Sbjct 2385 CCAGTCTTGAGACCATTCTTCCAAGCATAGAAATGCATCGAACTCATCTTAGCAAATGTT 2326 Query 109483 GGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCC 109542 || |||| | | |||| || || |||||| |||| || || | | ||| Sbjct 2325 GGTTCACCCATGTAGACATTCAAAGATTGTGACTGACAGATGTATGGAGCTCTGTCAATA 2266 Query 109543 GCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATA 109602 |||| || | | | |||||| || ||||| || |||||||| || ||||| || Sbjct 2265 GCCAAGTTAAGAAGAGTCTTTTGAGGGATCTCCCAAACTGTCTTGTATAAGTTCTTAATC 2206 Query 109603 TCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTC 109662 ||||| ||||| || || ||||| ||| ||| |||| |||| | | | ||| Sbjct 2205 TCATCTGGAATTCCCTTAATACCTTGAAGAGATCCATTT--CTTC-CCATCAAAGCATTC 2149 Query 109663 ATCTCTTTCGA---CCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACC 109719 | ||| | | ||| || || |||| | | ||| | || | || | |||||| Sbjct 2148 TTGACTTCCCAAGTCCAAAGTCCAGCCTTGATCAAATCTTTGACCAAGTGTTGGTTGACA 2089 Query 109720 ACGACAAATTCACCAGC-AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAA 109778 || ||||| ||||| ||| | | || ||| ||||| | || || |||||||| Sbjct 2088 CAGATGAATTCTCCAGCCAAGACT-CTTCTAGTGTATATGTTGGAAGTATATGGTTCGAA 2030 Query 109779 ACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAG 109838 || ||||| || || |||| ||||| ||| |||||| ||||| ||||| | | | Sbjct 2029 ACTTTCATTATTTCCAAGGACTTGTGAAGTACTAGCTGTTGGCATTGGAGCAACCAACAA 1970 Query 109839 ACTGTTTCGGAGACCCTTCGTCTTTACCCGCT-CACGCATTGCGTCCCAATCATAACGAC 109897 ||||| | ||| | | ||||| || | | || || ||||| || || | | Sbjct 1969 GGAGTTTCTTACACCATGC-TCTTTGATTTCTTCTCTCAAAGCATCCCAGTCGTATCTAT 1911 Query 109898 CACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAG 109957 || || | | ||| | |||| | ||| ||| | | |||| | | |||| Sbjct 1910 CAGTATGT---GGCTCTTTACCCCAAAGATCAAATTGGAATTTTCCCTGGGAAATTGGAG 1854 Query 109958 AACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGA-AGCCTCTAGT 110016 | || ||| | || || || || ||| || || || | || | || | Sbjct 1853 ATCCTGGGAATGTTTCATAATGTCCTTCTTCCTTAGCTAAGTCCAAGGACATAGTCATG- 1795 Query 110017 GCCGCATGATACATAGTCTCAAAAATATGAGCATT--CATGAGGCGAGACTCTTCACAGT 110074 || ||||| || || ||||| || || | || ||| || || ||||||| | Sbjct 1794 GCAGCATGGTAGATGGTCTCGAATATCTTCTTGTTGACATCAGT--AGCATCTTCACTTT 1737 Query 110075 CGAA-GGGAAGACCA-CAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAAT 110132 |||| |||| || | |||| || || || ||||| ||||| || | ||||| Sbjct 1736 CGAATGGGATTTTCATCTTTTGATAAGCA--TCAGCGAGACCTTGAACTCCAATTCCAAT 1679 Query 110133 GGGGCGATGCTTC--ATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCG 110190 ||| | || ||| | ||| || | ||| | || |||||| |||| || Sbjct 1678 GGGTC--TGTTTCTGAAGTTTGAATATTCAGCCTCTGGAACTGGGTAATAGTTATTATCA 1621 Query 110191 ATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCG 110250 || || | ||| | ||||| || | ||| | || | ||||||||| | || || ||| Sbjct 1620 ATAACTCTATTCAAGTTCTTAGTGATGGTCCTGGTTACTTCATGGAGCCTATCATAGTCG 1561 Query 110251 AACGTTTTCGTCTCCTT-ATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACAC 110309 ||| | || ||| ||||||| | | | | | |||||| |||||||| || || Sbjct 1560 AACA----CACCTTCTTCATTGACAAACCTTGCCAAGGAAATAGATGCAAGATTACAAAC 1505 Query 110310 AGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAAT 110369 || | || || || || |||||||||| |||||| || | ||| || ||||| || Sbjct 1504 AGCAACCTGATCCTTATCTGTGTATTCCATAATTTCACAGCAGAGGTTTGAGCTCTTGAT 1445 Query 110370 GACACCCAAGTTCTT-CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATG 110428 | ||||| | || ||| || ||||| ||| | || |||||||||||||||| Sbjct 1444 -AGTTCCAAGATTTTGCTGGTTAGATTTCCTATTGGCAGAGTCTTTATAGAGCATGTATG 1386 Query 110429 GGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAG 110488 || ||| || || |||| || | | ||| || ||||| | | || |||| Sbjct 1385 GGACACCGGTCTCGATCTGGGATTCAATAATTGCGTTCCAGAGGTGTTGAGCCTTTACAG 1326 Query 110489 TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGT 110548 | | | |||||| || || || | || ||||| | |||||||| | ||| Sbjct 1325 TCTTGACTCCTTTACCTTCTTCTTCATATTGAGTATACAATTTTTCAAATTCTTCTCCCC 1266 Query 110549 ACACATCAGAAAGACCCTTCGC-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCC 110607 | || | || | || || || | ||||||||||||| ||| || ||| |||| Sbjct 1265 A-ACTTTCAAACAATCCAGGGCACTCATTCGGACAGAAGAGGGTCCAGTTGCCATCCTCT 1207 Query 110608 TCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACG 110666 ||||| ||||||||||||||||| | |||||| || |||| | ||| | || | Sbjct 1206 TCAACTCTCTTCATGAACAGGTCTCAGACCCACATAGCGTAGAACAAGTCTCTTGCTCTG 1147 Query 110667 AGCCTCTTCATC---ACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTG 110723 | |||||| ||| ||||| || | ||| || || |||||| | || Sbjct 1146 ----TTTTCATCTTTACCATGGTTCTTTTTGAGGTTCAAGAACTCATAGATATCTGCATG 1091 Query 110724 CCATGGTTCGAGATAGACAGCGATGGATCCCTTAC---GACGACCCGCCTGGTTAACATA 110780 ||||||||||||||||| |||| || || || | || || | |||| |||||| Sbjct 1090 CCATGGTTCGAGATAGATGGCGAAGGCGCCTTTTCTCTTACCGCCTCCTTGGTCAACATA 1031 Query 110781 GCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGT 110840 | ||| || |||||||||| | ||||| || | | ||||| || | || || || Sbjct 1030 TCTTGCAGTATCATTGAAGACTCGAAGCATGGGCACCAATCCATTAGAACGTCCGTTGGT 971 Query 110841 ACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGC 110900 || ||||| || || | | | ||| ||| | | | |||||||| || || Sbjct 970 TCCTCTAATGTAAGAATTGGTCGATCTGATGCAGTGAACAGCAAGTCCAATACCTCCGGC 911 Query 110901 CCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGC 110960 |||| || ||||| | | | ||| |||| || ||||| || ||||| | Sbjct 910 ATTCTTAGAGATAATAGCACATTGCTTCAATGTGTCATAGATTCCATCTATAGAATCATC 851 Query 110961 CTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAG 111020 | | || | | ||||||||| ||| || || || ||||| | ||||| | Sbjct 850 CCGCATTGCGAGCAAGAAGCAAGAACTCATTTGTGGTTTTGGAGTTCCTGAGTTGAACAA 791 Query 111021 TGTAGGTGTCGCATGAATGAAC 111042 ||||| || ||||| ||||| Sbjct 790 GGTAGGAGTAGCATGGGTGAAC 769 >seq29984 Length=2719 Score = 122 bits (134), Expect = 1e-22 Identities = 562/881 (64%), Gaps = 22/881 (2%) Strand=Plus/Minus Query 110173 GGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCA 110232 |||||| |||| ||| || || | ||| | |||||| || | |||| | || | Sbjct 1638 GGGTAATAGTTATTGTCAATAACTCTATTCAAATTCTTGGTAATAGTCCTTGTAACAGAG 1579 Query 110233 TGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTT----ATTGACATATTTGGGGAGAGC 110288 || || || || |||||||| | |||||| |||||| | | | || Sbjct 1578 TGAAGCTTTTCATAATCGAA-------GACTCCTTCATCATTGACGAACCTTACTAAAGA 1526 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 |||||| || || ||||| |||| | ||||| || || ||||||| || || Sbjct 1525 AATAGATGCCAGGTTGCAGACAGCTACTTGATCTTTATCAGTATATTCCATAACCTCACA 1466 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAG-TTCTTCTGATTCGATTTGGAGTTGCATG 110407 || | || || || || || | ||||| |||| ||||| ||||| |||| | Sbjct 1465 GCAAAGATTCGAGCTTTTGAT-AGTTCCAAGATTCTGTTGATTAGATTTCTTGTTGGCAG 1407 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 |||||||||||||||||||| || || || |||| || | | ||| || |||| Sbjct 1406 AGTCCTTATAGAGCATGTATGGAACCCCTGTCTCAATCTGGGATTCAATAATAGCATTCC 1347 Query 110468 ATACAT-CGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTAC 110526 | | || | ||| | | | ||| || | ||||| | ||| || || || || Sbjct 1346 AAAGATGCTGCGCCTTG-ATTGTTTTCTTTCCTTTGCCTTCTTGCTCATATTTAGTATA- 1289 Query 110527 AAGTCCT-CAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGA 110584 |||| | | ||||| | || | ||| | | | ||| | ||| | ||||| | Sbjct 1288 AAGTGTTTCGAATTCTTCACCCCAGCATTCAAACA-ATCCTGGACATTGGTTTGGACAAA 1230 Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644 |||||| ||| | ||| | |||||||| ||||||||||||| ||| | ||| | | Sbjct 1229 AGAGGGTCCAGTCACCATCTTCCTCAACTCTCTTCATGAACAAATCACAGACCCAAAGAG 1170 Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704 | |||| | ||| | | ||||| | ||| ||||| || ||||| Sbjct 1169 CATAGAACAAGTCTCTTGCTCTGTTTTCTTCTTTACCATGGTTCTTCTTTAAACTCAAAA 1110 Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---AC 110761 | || ||| || | |||||| |||||||||||||| || | | ||| || | || Sbjct 1109 ACTCATAGATGTCTGCGTGCCAAGGTTCGAGATAGACGGCAAAAGCTCCTTTTCTCTTAC 1050 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 ||| | |||| ||||| | || ||| || ||||||||||||| || | | || Sbjct 1049 CACCTCCTTGGTCGACATATCTAGCAGTGTTGTTATAGACCCTGAGCATTGGGACTACTC 990 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 ||| || ||||| || || || || ||| | || | ||| |||||| Sbjct 989 CATTAGAGATTCCATTAGTGCCTCTGATGTAGGAGGATGTAGCTCTGATGCAATGGATAG 930 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAA 110941 | ||||||||||| || |||| || ||||||| | |||| || |||| | Sbjct 929 CAAGTCCAATACCACCTGCGTTCTTAGAGATAATGGCACACTGTTTGAGAGTGTCATAGA 870 Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001 | || ||||| ||||| | | | |||| || |||||| ||| ||| || || | Sbjct 869 TTCCTTCAATAGAATCCTCTTGCATCGCAAGTAAAAAGCACGAACTCATTTGTGGTTTGG 810 Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 | ||||| | ||| || || || || | |||||| ||||| Sbjct 809 GAGTTCCTGAATTAAACAGAGTGGGGGATGCATGAGTGAAC 769 >seq11536 Length=1331 Score = 100 bits (110), Expect = 3e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| |||||||| | |||||| | || ||| |||||||||||| ||||| | | Sbjct 437 TGAAGTCCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGTCCTGGCATCAAAGAT 496 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 || || || ||||||||||| || ||||| ||| || || ||||| || || |||||| Sbjct 497 CTCTTTTTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAAAGATTCCTTCGACACAG 556 Query 119628 GCGAAAGCGAATAGACGCTCAGC-AAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCCA 119686 || || |||| || | ||||| || ||| ||||| || ||| || | |||||| Sbjct 557 GCAAAGGCGATGAGCCTTTCAGCGAAGCTATCG-CTCTTGTTGATCCATTTAATAGCCCA 615 Query 119687 GTTGGCCTT 119695 | ||||| Sbjct 616 TTCAGCCTT 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588559395188600