Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq741 102 5e-17 seq49392 84.2 1e-11 seq10326 84.2 1e-11 >seq741 Length=354 Score = 102 bits (112), Expect = 5e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 34789 TTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848 ||||||||||||| || ||||| || | ||| | |||| || || || ||||| || | Sbjct 1 TTTCTTTCTGAATATTGTAGTCTGACAATGTTCTTCCATCCTCAAGTTGCTTTCCAGCGA 60 Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908 | || |||| |||||||||| | || | || ||||| || |||||| |||||| Sbjct 61 AGATAAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGAATCTTGGTCTTGACGT 120 Query 34909 ATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 | || | || | ||| ||||| | || || || ||||| ||||| ||||||| Sbjct 121 TGTCAATAGTGTCGCTCTGCTCGACATCAAGAGTAATAGTCTTTCCAGTGAGGGTCTTCA 180 Query 34969 CAAAGATCTGCATATT 34984 | ||||| |||||||| Sbjct 181 CGAAGATTTGCATATT 196 >seq49392 Length=484 Score = 84.2 bits (92), Expect = 1e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||| || || | ||||| ||||| || | || |||||||| || ||||||||||| || Sbjct 316 TCCACCTCTGAGTCTCAAGACCAAATGGAGGGTACTTTCTTTTTGGATGTTATAGTCGGA 375 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 | | ||| |||| || || || ||||| || || || |||| |||||||||| | || Sbjct 376 CAAGGTTCTGCCATCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGG 435 Query 34874 CACCCCCTCCTTGTCGCTAATCTT 34897 | || || ||||| |||||| Sbjct 436 AATACCTTCTTTGTCTTGAATCTT 459 >seq10326 Length=2715 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||||||| | | || | ||||||||||||||| || ||||| ||||| ||||| | Sbjct 2315 TTCCTCCCTTGAGTCTGAGAACCAAGTGAATTGTAGACTCCTTCTGGATGTTGTAGTCAG 2374 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | ||| ||| | | || || || || ||||| ||||| || || | ||||||||| | Sbjct 2375 AGAGGGTTCTTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTTTGCTGGTCAGCTG 2434 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || | || ||||| |||| | | || | ||| ||| | Sbjct 2435 GAATTCCTTCTCTCTCCTGCATCTTGGTCTTGATTGTGTCAATTGTATCAGATTGCTCGA 2494 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATAT 34983 |||||| ||| || || | || || | ||||| |||||||| ||||||| Sbjct 2495 CATCGAGGGTCATTGTCCTACCAGTCAAGGTCTTAACAAAGATTTGCATAT 2545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324409715118936