Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq11536 120 4e-22 >seq11536 Length=1331 Score = 120 bits (132), Expect = 4e-22 Identities = 307/464 (66%), Gaps = 5/464 (1%) Strand=Plus/Plus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 || || || |||||| || | |||||||||||| |||||||| ||||| ||| Sbjct 419 AAGCAAGCGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAA 478 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAA-GATCCAGAAAA 37291 | ||||||||| ||| ||| ||||| | |||||| ||||| |||||| ||||| || || Sbjct 479 AGTCCTGGCATCAAAGATCTCTTTTTGAGCCAAAAGATTGC-GCAAAATGATCCGGAGAA 537 Query 37292 GAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATC 37351 || || ||||| || ||||| || | || | | | |||| | || | | Sbjct 538 AAAGATTCCTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTATCGCTCTTGT- 596 Query 37352 AGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGC 37411 |||||||| | | ||| || ||||| ||| || ||||| ||||||| || Sbjct 597 --TGATCCATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCAATAGC 654 Query 37412 TTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATA 37471 ||| ||||| || | ||| |||| || | ||||| |||||||| || | || Sbjct 655 TTTGAAGAGGAAATCTTTCTCTTGTTCGTCACTAATATAGGTATCAATCAGGAGGGAGTA 714 Query 37472 CATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGA 37531 | ||| || || || || || | || || || || || || || |||| | Sbjct 715 GGTCTCACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACTTCTGG 774 Query 37532 TAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGC 37591 || ||| || || | || ||| | ||||| || || || || || ||| Sbjct 775 TACTTGGACTTCAGAAGCGAAGTTCTCAATCAAGTTCTCGAGGACGATACCGTCTGAAGC 834 Query 37592 TGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT 37635 |||||||| |||||||| || || || || ||||||||||||| Sbjct 835 AGCAAAGAAGGCAAGAACGTACTTAATGAAGTGTCTTTCATCAT 878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591897832115480