Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq17286 95.1 2e-14 >seq17286 Length=2746 Score = 95.1 bits (104), Expect = 2e-14 Identities = 187/271 (69%), Gaps = 7/271 (3%) Strand=Plus/Minus Query 213780 GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACC 213839 ||||| | |||| |||||| || || ||| ||||||| |||||||||||| |||| Sbjct 1236 GGACAGAAGAGGGTCCAGTTGCCATCCTCTTCAACTCTCTTCATGAACAGGTCTCAGACC 1177 Query 213840 CACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTT-TTTGCGCAG 213898 |||| ||| ||||| ||| || | || | || || ||| ||| ||| | | Sbjct 1176 CACATAGCGTAGAACAAGTCTCTTGCTCTGTTTTCATCTTTACCATGGTTCTTTTTGAGG 1117 Query 213899 ATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGG 213958 || || || ||| |||| || || ||||| || || | |||||||| |||||||| Sbjct 1116 TTCAAG-AACTCATAGATATCTGCATGCCATGGTTCGAGATAGATGGCGAAGGCGCCTTT 1058 Query 213959 CCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCAT-GTTGAAGATGCGCAGGACGG 214014 ||||| ||| || ||||| || || | || || ||||||| || || | || Sbjct 1057 TCTCTTACCGCCTCCTTGGTCAACATATCTTG-CAGTATCATTGAAGACTCGAAGCATGG 999 Query 214015 GTACCAGCCCGTTGGACTGTCCGTTGGTTCC 214045 | |||| || || || ||||||||||||| Sbjct 998 GCACCAATCCATTAGAACGTCCGTTGGTTCC 968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930873891918080