Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq17286 165 4e-36 seq29984 149 3e-31 >seq17286 Length=2746 Score = 165 bits (182), Expect = 4e-36 Identities = 299/435 (69%), Gaps = 2/435 (0%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 |||||| ||| ||| || | ||| | |||||| || || || || ||||| ||||| Sbjct 1206 TCAACTCTCTTCATGAACAGGTCTCAGACCCACATAGCGTAGAACAAGTCTCTTGCTCTG 1147 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 |||| ||||| || || |||||||| || | ||||| ||| | ||||||| |||||| Sbjct 1146 TTTTCATCTTTACCATGGTTCTTTTTGAGGTTCAAGAACTCATAGATATCTGCATGCCAT 1087 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 ||||| | |||||| || || |||||||| || || || ||||| || || |||||| Sbjct 1086 GGTTCGAGATAGATGGCGAAGGCGCCTTTTCTCTTACCGCCTCCTTGGTCAACATATCTT 1027 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA 26161 ||||| |||||||| ||| | ||| || || |||||| | ||| |||||| || | Sbjct 1026 GCAGTATCATTGAAGACTCGAAGCATGGGCACCAATCCATTAGAACGTCCGTTGGTTCCT 967 Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCAT 26221 ||| | || |||||||| || |||| || || || || || || || Sbjct 966 CTAATGTAAGAATTGGTCGATCTGATGCAGTGAACAGCAAGTCCAATACCTCCGGCATTC 907 Query 26222 TTTGAAATAGCTGCACAAT-CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTT 26280 || || ||| ||||| | || || ||| || | ||||| | ||| |||| | Sbjct 906 TTAGAGATAATAGCACATTGCTTCAA-TGTGTCATAGATTCCATCTATAGAATCATCCCG 848 Query 26281 CATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGT 26340 |||| | | || || |||||| | ||| | | | |||||||| || || || || Sbjct 847 CATTGCGAGCAAGAAGCAAGAACTCATTTGTGGTTTTGGAGTTCCTGAGTTGAACAAGGT 788 Query 26341 CGGTGTAGCATGAGT 26355 || |||||||| || Sbjct 787 AGGAGTAGCATGGGT 773 Score = 98.7 bits (108), Expect = 5e-16 Identities = 122/166 (73%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 24980 TCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTT 25039 |||| |||| | | |||||||| || | || |||||||||| ||| |||||||| Sbjct 2117 TCAA-ATCTTTGACCAAGTGTTGGTTGACACAGATGAATTCTCCAGCCAAGACTCTTCTA 2059 Query 25040 ATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTA 25099 | ||| ||| ||||| ||||||| |||| |||||||||||| | || ||| |||||| Sbjct 2058 GTGTATATGTTGGAAGTATATGGTTCGAAACTTTCATTATTTCCAAGGACTTGTGAAGTA 1999 Query 25100 GATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCAT 25145 |||||||||||| || | || | || ||||| | ||||| Sbjct 1998 CTAGCTGTTGGCATTGGAGCAACCAACAAGGAGTTTCTTACACCAT 1953 >seq29984 Length=2719 Score = 149 bits (164), Expect = 3e-31 Identities = 318/471 (68%), Gaps = 8/471 (2%) Strand=Plus/Minus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 |||||||| || | ||| ||| ||| || ||||||| ||| ||| || ||||| Sbjct 1239 TTTGGACAAAAGAGGGTCCAGTCACCATCTTCCTCAACTCTCTTCATGAACAAATCACAG 1180 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 | ||| | ||||| || || ||||| ||||| |||||||||| || || ||||| ||| Sbjct 1179 ACCCAAAGAGCATAGAACAAGTCTCTTGCTCTGTTTTCTTCTTTACCATGGTTCTTCTTT 1120 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068 | | || || ||| | || |||| |||||| ||||| | ||||| |||||| ||| Sbjct 1119 AAACTCAAAAACTCATAGATGTCTGCGTGCCAAGGTTCGAGATAGACGGCAAAAGCTCCT 1060 Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128 ||||| || || || ||||| || || ||||| ||||| | || | || | | |||| Sbjct 1059 TTTCTCTTACCACCTCCTTGGTCGACATATCTAGCAGTGTTGTTATAGACCCTGAGCATT 1000 Query 26129 GGAACTAATCCAGTTGAAAATCCGTTTGTGC-TATGAATCTTGGATCCTGTCGATCTAAT 26187 || |||| |||| | || | ||| || |||| | ||| | | ||| ||| | ||| || Sbjct 999 GGGACTACTCCATTAGAGATTCCATTAGTGCCTCTGA-TGTAGGAGGATGTAGCTCTGAT 941 Query 26188 ---ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGA 26244 || | |||| | || || ||||| || || || ||| ||||| | | Sbjct 940 GCAATGGATAGCAAGT---CCAATACCACCTGCGTTCTTAGAGATAATGGCACACTGTTT 884 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 | || || | ||||||| || ||| ||| ||| | | |||||| || ||| Sbjct 883 GAGAGTGTCATAGATTCCTTCAATAGAATCCTCTTGCATCGCAAGTAAAAAGCACGAACT 824 Query 26305 TAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGT 26355 | ||| | | | |||||||||||||| | || || | |||||||| Sbjct 823 CATTTGTGGTTTGGGAGTTCCTGAATTAAACAGAGTGGGGGATGCATGAGT 773 Score = 84.2 bits (92), Expect = 1e-11 Identities = 119/166 (72%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 24980 TCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTT 25039 |||| |||| | | || |||| ||||| | ||||| ||||| | | ||||||||| Sbjct 2117 TCAA-ATCTTTTACTAAATGTTGATTTACGCAGATAAACTCTCCTGCAAGAACTCTTCTC 2059 Query 25040 ATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTA 25099 | | | || ||||| | |||||||| | ||||||||||||| | |||||||||| Sbjct 2058 GTGTAAATATTGGAAGTATAAGGTTCAAAGCTCTCATTATTTCCTAGAACTTGAGAAGTA 1999 Query 25100 GATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCAT 25145 || ||||||||| || | ||||| || ||||| | ||||| Sbjct 1998 CTGGCAGTTGGCATTGGAGCAACCAATAGAGAGTTTCTAACACCAT 1953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252865489936025