Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3822 113 5e-20 >seq3822 Length=3285 Score = 113 bits (124), Expect = 5e-20 Identities = 497/770 (65%), Gaps = 44/770 (6%) Strand=Plus/Minus Query 139285 CATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTT 139344 |||| || ||| ||||||||| | | |||||||| |||||||| || || ||| Sbjct 1279 CATAAAAAGCAGCCATATTTGCTAATAAAGCTTGTGCAGTGCAGATATTTGATGTAGCTC 1220 Query 139345 TGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTT 139404 | ||||| |||||||| ||||||||||| || | ||| | ||| | || || || | Sbjct 1219 TATCTCTCCTAATATGTTGCTCTCTAGTCTGCATTGCCATTCTCAAGGCTCTGTTTCCAT 1160 Query 139405 CGCTGTCCACTGACTGAC--CTACAATTCTGCCAGGTATCTTTC-TCTTATACTTGTCTG 139461 |||| |||||||| | | || ||| || || | || ||| || ||| ||| Sbjct 1159 GAGCGTCC--TGACTGACACCAATAACTCTTCCTGGAAGTTTGAATCTAAT-CTTTTCTT 1103 Query 139462 TTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTGCA 139521 || ||| || | |||||||| ||||| ||| ||||||| || | |||| ||||| | Sbjct 1102 TTACTGCGAAATAGGCAGCATGTGGACCACCGAATCCCATTGGCACTCCAAGTCTTTG-A 1044 Query 139522 TACTACCTACA-GCAATATCAAATCCCCACTCACCTACAGGTTG---CAT--TAACACCT 139575 | ||| | | || ||||| |||| ||| ||| || | ||| ||| || | Sbjct 1043 GCCAACCCATAAGCGATATCTGCTCCCATCTCGCCTGGAGACTTAGTCATAGTAAGACTT 984 Query 139576 GACACATAGGATCTACGATTGCTATCTTGACACATTTGTATACTTCTGCAACTCTTAGTA 139635 |||| ||||| | || || || | |||| | ||| || | ||||| Sbjct 983 AGAACATCGGATCCAA---TG--ATGAAGAACCCTTTGGA--CTTGTGTACCTCTTCTGC 931 Query 139636 AT--GCATCACAATATTTTAGTTGTCCATTCTTATTTGGAAGTTGAACTATCATTGCAAA 139693 | ||| |||| || | | ||||| || |||| ||| || | | |||| Sbjct 930 CTTGGCACTCCAATCTTGGATGTTACCATTAATACCTGGATTTTGGACGAGGACACCAAA 871 Query 139694 TGCATCATCAAATTCTATGAGAGGAACAGTATCAAA---GATATCAAGCATCTTAATCTC 139750 ||| || ||||| ||| || |||| | ||| || || | || || Sbjct 870 AATATCTTC----TCTATCTGAGAAATCGTATTCATTCGGATCTCCTACAAC--AACTTC 817 Query 139751 AATGCCTAATGGTTTTGCTCTGGTTTCTAGAACTGCTAGAGT----TTGTGGGAATATAT 139806 ||| |||||||| | |||||||||| || ||| | | ||| |||| || | | Sbjct 816 AATTCCTAATGGCTCAGCTCTGGTTTTTATTACTTCAATAGTATGCTTGTAGGTTTGG-T 758 Query 139807 CTTGATCAACTATTACAGTCTTCTTATCTCTTGTAGAATT----ATATGCTAACAGCATT 139862 | | ||| | ||| || || ||||| | |||| ||| || | | |||| Sbjct 757 CACTAACAAAGAATACGTTCCTC----CTCTTATTAAATTGAGAATAAGCCATGAACATT 702 Query 139863 GCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTA 139922 || || ||| | ||||| ||||||||||| || || || || || || || || || Sbjct 701 GCTTCAGCTCCAGCAGTGGCTTCATCTAAGAGGGAAGCATTGGCAATATCCAAACCGGTC 642 Query 139923 AGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCA 139982 | || | || | || ||| |||||| || |||||||||||| |||| ||||| Sbjct 641 AAATCAGCAATCATAGTCTGGAAATTGAGCAAGCTTTCCAATCTTCCTTGAGCAATCTCT 582 Query 139983 GCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTT 140032 || || || || ||||||| ||||||||| | || ||||| ||||| || Sbjct 581 GCCTGGTATGGTGTGTAAGGAGTGTACCAATTTGGGTTCTCTAGAACATT 532 Score = 96.9 bits (106), Expect = 4e-15 Identities = 321/493 (65%), Gaps = 16/493 (3%) Strand=Plus/Minus Query 138201 CCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACA 138260 || ||||| |||||||||||||| || ||| || ||||| | || | |||||||||| Sbjct 2401 CCTGGACCACCACCTCCATGTGGGATTGTGAAAGTTTTATGAAGGTTCAAATGACATACA 2342 Query 138261 TCTGCACC-ATAG-TCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCAT 138318 ||| | || |||| | |||| || | || | | ||||| | ||| || |||| Sbjct 2341 TCTCCTCCAATAGTTTTGATGGAGCTG--TGTCCCATCATAGCATTCATATTAGCTCCAT 2284 Query 138319 CGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTCTGATGTTTGTTT 138378 | | || |||| ||| |||| | ||||| ||| || | | || | | || Sbjct 2283 CAATGTAGACCTTACCTCCATATTTATGAATTGTCTCTGTGATTTCTAAAATATCTTCTT 2224 Query 138379 CAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAG----TTCAAATGT- 138433 |||| || ||||||||||||||||| || ||||| |||| || || | | |||| Sbjct 2223 CAAAAACTCCATGAGTCGATGGATAGGTGATCATGGTACAAGAAAGGTTATCCTTATGTA 2164 Query 138434 ATTCA-TGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATCATCACACT 138492 | ||| ||||||| ||||||| | || | || || | | ||| | | Sbjct 2163 ACTCAGCCTTTGCTTT------AAGATCTTCAACATCAACATTTCCGTTCTTGTCAGATT 2110 Query 138493 TGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTG 138552 | ||| | |||| ||||| || | | ||| ||| || || |||||||| || | Sbjct 2109 TCACAGCAACAATCTTCATACCCAAGAGCATTGCTGAAGCTGGGTTGGTTCCATGAGCCG 2050 Query 138553 ACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGA 138612 | || || ||||| | |||||| | | ||||| ||| ||| | | || Sbjct 2049 AGGTAGGGATGAGACAGATATTTCTGTGTCCCTCTCCATTAGCTTTATGGAAATTTCTGA 1990 Query 138613 TTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAAT 138672 | | ||| || || | |||||| || || | ||| || ||||||| ||| |||| | Sbjct 1989 TAGTTAAAAGCCCAGAATACTCTCCTTGAGCTCCACTATTTGGTTGTATTGAGATAGCTT 1930 Query 138673 CAAAACCTGTGAT 138685 |||| |||||||| Sbjct 1929 CAAACCCTGTGAT 1917 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 137822 TGACTCAGACTCTGTGGGTTCTACCATCATAGTTCCTAACACAGGCCACGATAGTGTAGG 137881 || |||||||||||| || |||||||| ||| ||| || || | |||| ||||| Sbjct 2828 TGGCTCAGACTCTGTTGGCTCTACCATGATACCTCCAGCGACTGGGAAGGATACAGTAGG 2769 Query 137882 TGCATGAAATCCATAGTCCATAAGTCTCTTTGCTATATCTTCTGCTGTTACT 137933 ||||| |||||||| ||||| |||||||| || || |||||| | || ||| Sbjct 2768 AGCATGGAATCCATAATCCATGAGTCTCTTGGCAATGTCTTCTTCAGTAACT 2717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578588852719240