Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq11536 98.7 1e-14 >seq11536 Length=1331 Score = 98.7 bits (108), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 ||||| || | | ||||| |||||| ||| || || ||||| | | ||| Sbjct 443 CCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGTCCTGGCATCAAAGATCTCTTT 502 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||||||||| ||||| || || ||||||||||| || ||||| ||||||| Sbjct 503 TTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAAAGATTCCTTCGACACAGGCAAAG 562 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||||||||| || || ||| | ||| || |||||||||||| || || ||||| Sbjct 563 GCGATGAGCCTTTCAGCGAAGCTATCG-----CT-CTTGTTGATCCATTTAATAGCCCAT 616 Query 869360 TCGGCCTTTTT 869370 || ||||| || Sbjct 617 TCAGCCTTCTT 627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6102495405783079