Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq11536 98.7 2e-14 >seq11536 Length=1331 Score = 98.7 bits (108), Expect = 2e-14 Identities = 218/326 (67%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || | | |||||||||||| ||||| || || ||||| | | ||| Sbjct 443 CCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGTCCTGGCATCAAAGATCTCTTT 502 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||||||||| || || || || ||||||||||| || ||||| ||||||| Sbjct 503 TTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAAAGATTCCTTCGACACAGGCAAAG 562 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||| ||||| || || || | || || | ||||||||||| || || ||||| Sbjct 563 GCGATGAGCCTTTCAGCGAAGCTATC---GCTC---TTGTTGATCCATTTAATAGCCCAT 616 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| || | || | | | || || || |||||| || ||||| Sbjct 617 TCAGCCTTCTTTTTGACGGTATCAATATTTTCAATAGCTTTGAAGAGGAAATCTTTCTCT 676 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 ||| | | ||||| || || ||||| ||||||||||| |||||||| || Sbjct 677 TGTTCGTCACTAATATAGGTATCAATCAGGAGGGAGTAGGTCTCACTATGGATGTTCTCC 736 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCA 794666 || | ||||| || || ||||| Sbjct 737 ATCATACTTTGGAATCCGTAGAAGCA 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7910226982716693