Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq49069 122 6e-23 seq741 105 4e-18 seq10326 91.5 1e-13 seq49392 86.0 4e-12 >seq49069 Length=388 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| || | || ||||||| ||||| ||| |||||||| |||||||| || || Sbjct 1 CCTCCTCTGAGTCTGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAG 60 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | || || ||||||||||| |||||||| |||| |||||||||| | || Sbjct 61 AGAGTTCTTCCGTCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGG 120 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || ||||| | || | || | ||||||| Sbjct 121 ATACCTTCCTTATCCTGAATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACA 180 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || ||||||||||| ||||| ||||| Sbjct 181 TCGAGGGTAATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCAT 227 >seq741 Length=354 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || |||||||| || ||||| || | | | |||| || ||||||||||| |||||| Sbjct 3 TCTTTCTGAATATTGTAGTCTGACAATGTTCTTCCATCCTCAAGTTGCTTTCCAGCGAAG 62 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || |||| |||||||||| | || | || ||||| || | || || |||||| Sbjct 63 ATAAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGAATCTTGGTCTTGACGTTG 122 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||||||||||| || || |||||||| ||||||||||| || Sbjct 123 TCAATAGTGTCGCTCTGCTCGACATCAAGAGTAATAGTCTTTCCAGTGAGGGTCTTCACG 182 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 183 AAGATTTGCAT 193 >seq10326 Length=2715 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||||||| | | || || |||| |||||| || ||||||||| ||||| ||||| | Sbjct 2315 TTCCTCCCTTGAGTCTGAGAACCAAGTGAATTGTAGACTCCTTCTGGATGTTGTAGTCAG 2374 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | | | || || ||||||||||| || ||||| || | ||||||||| | Sbjct 2375 AGAGGGTTCTTCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTTTGCTGGTCAGCTG 2434 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTC--ATTGGCCTC 34926 | | || || | || | || || |||| | | || | || |||| ||| Sbjct 2435 GAATTCCTTCTCTCTCCTGCATCTTGGTCTTGATTGTGTCAATTGTATCAGATTG--CTC 2492 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| | ||| || ||| | || || | |||||| |||||||| ||||| Sbjct 2493 GACATCGAGGGTCATTGTCCTACCAGTCAAGGTCTTAACAAAGATTTGCAT 2543 >seq49392 Length=484 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||| || || | |||| ||||| || | ||| || || || || ||||||||||| || Sbjct 316 TCCACCTCTGAGTCTCAAGACCAAATGGAGGGTACTTTCTTTTTGGATGTTATAGTCGGA 375 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 | | | | |||| || ||||||||||| |||||||| |||| |||||||||| | || Sbjct 376 CAAGGTTCTGCCATCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGG 435 Query 34870 CACCCCCTCCTTGTC 34884 | || || ||||| Sbjct 436 AATACCTTCTTTGTC 450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325468184637353